Gene : AL6G43280 A. lyrata v2.1
Defline:  (1 of 89) KOG1987 - Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domains Genomic Order:  3085
Name:  ? AL6G43280 Secondary Identifier:  ? PAC:35928669
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G43280 0.5kb upstream 0.5kb upstream 2179   true scaffold_6: 19560581-19562759 Arabidopsis lyrata
AL6G43280 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 19560581-19561080 Arabidopsis lyrata
AL6G43280 0.5kb downstream 0.5kb downstream 2179   true scaffold_6: 19561081-19563259 Arabidopsis lyrata
AL6G43280 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 19562760-19563259 Arabidopsis lyrata
AL6G43280 1.0kb upstream 1.0kb upstream 2679   true scaffold_6: 19560081-19562759 Arabidopsis lyrata
AL6G43280 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 19560081-19561080 Arabidopsis lyrata
AL6G43280 1.0kb downstream 1.0kb downstream 2679   true scaffold_6: 19561081-19563759 Arabidopsis lyrata
AL6G43280 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 19562760-19563759 Arabidopsis lyrata
AL6G43280 2.0kb upstream 2.0kb upstream 3679   true scaffold_6: 19559081-19562759 Arabidopsis lyrata
AL6G43280 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 19559081-19561080 Arabidopsis lyrata
AL6G43280 2.0kb downstream 2.0kb downstream 3679   true scaffold_6: 19561081-19564759 Arabidopsis lyrata
AL6G43280 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 19562760-19564759 Arabidopsis lyrata
AL6G43280 5.0kb upstream 5.0kb upstream 6679   true scaffold_6: 19556081-19562759 Arabidopsis lyrata
AL6G43280 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 19556081-19561080 Arabidopsis lyrata
AL6G43280 5.0kb downstream 5.0kb downstream 6679   true scaffold_6: 19561081-19567759 Arabidopsis lyrata
AL6G43280 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 19562760-19567759 Arabidopsis lyrata
AL6G43280 10.0kb upstream 10.0kb upstream 11679   true scaffold_6: 19551081-19562759 Arabidopsis lyrata
AL6G43280 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 19551081-19561080 Arabidopsis lyrata
AL6G43280 10.0kb downstream 10.0kb downstream 11679   true scaffold_6: 19561081-19572759 Arabidopsis lyrata
AL6G43280 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 19562760-19572759 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029521 5273 Angiosperm View MSA
122380550 5261 Brassicaceae View MSA
123802778 5264 Brassicales-Malvales View MSA
124299944 5266 SBM View MSA
124151237 5268 Malvidae View MSA
124041256 5270 Rosid View MSA
123752970 5271 Pentapetalae View MSA
122797935 5272 Eudicot View MSA
123429159 5275 Viridiplantae View MSA
121349273 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain