Gene : AL6G44170 A. lyrata v2.1

Defline:  (1 of 4) K01870 - isoleucyl-tRNA synthetase (IARS, ileS) Genomic Order:  3170
Name:  ? AL6G44170 Secondary Identifier:  ? PAC:35927085

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata TRNA-CHARGING-PWY Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G44170 0.5kb upstream 0.5kb upstream 8120   true scaffold_6: 20181501-20189620 Arabidopsis lyrata
AL6G44170 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 20189121-20189620 Arabidopsis lyrata
AL6G44170 0.5kb downstream 0.5kb downstream 8120   true scaffold_6: 20181001-20189120 Arabidopsis lyrata
AL6G44170 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 20181001-20181500 Arabidopsis lyrata
AL6G44170 1.0kb upstream 1.0kb upstream 8620   true scaffold_6: 20181501-20190120 Arabidopsis lyrata
AL6G44170 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 20189121-20190120 Arabidopsis lyrata
AL6G44170 1.0kb downstream 1.0kb downstream 8620   true scaffold_6: 20180501-20189120 Arabidopsis lyrata
AL6G44170 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 20180501-20181500 Arabidopsis lyrata
AL6G44170 2.0kb upstream 2.0kb upstream 9620   true scaffold_6: 20181501-20191120 Arabidopsis lyrata
AL6G44170 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 20189121-20191120 Arabidopsis lyrata
AL6G44170 2.0kb downstream 2.0kb downstream 9620   true scaffold_6: 20179501-20189120 Arabidopsis lyrata
AL6G44170 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 20179501-20181500 Arabidopsis lyrata
AL6G44170 5.0kb upstream 5.0kb upstream 12620   true scaffold_6: 20181501-20194120 Arabidopsis lyrata
AL6G44170 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 20189121-20194120 Arabidopsis lyrata
AL6G44170 5.0kb downstream 5.0kb downstream 12620   true scaffold_6: 20176501-20189120 Arabidopsis lyrata
AL6G44170 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 20176501-20181500 Arabidopsis lyrata
AL6G44170 10.0kb upstream 10.0kb upstream 17620   true scaffold_6: 20181501-20199120 Arabidopsis lyrata
AL6G44170 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 20189121-20199120 Arabidopsis lyrata
AL6G44170 10.0kb downstream 10.0kb downstream 17620   true scaffold_6: 20171501-20189120 Arabidopsis lyrata
AL6G44170 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 20171501-20181500 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041086 5273 Angiosperm View MSA
122375550 5261 Brassicaceae View MSA
123831002 5264 Brassicales-Malvales View MSA
124350072 5266 SBM View MSA
124238585 5268 Malvidae View MSA
124063415 5270 Rosid View MSA
123737064 5271 Pentapetalae View MSA
122787980 5272 Eudicot View MSA
121346625 5274 Embryophyte View MSA
123428554 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain