Gene : AL88U10030 A. lyrata v2.1

Defline:  (1 of 4) PTHR31875:SF0 - PROTEIN DEHYDRATION-INDUCED 19-RELATED Genomic Order:  3
Name:  ? AL88U10030 Secondary Identifier:  ? PAC:35947662

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL88U10030 0.5kb upstream 0.5kb upstream 2591   true scaffold_88: 19081-21671 Arabidopsis lyrata
AL88U10030 0.5kb upstream 0.5kb upstream 500   false scaffold_88: 21172-21671 Arabidopsis lyrata
AL88U10030 0.5kb downstream 0.5kb downstream 2591   true scaffold_88: 18581-21171 Arabidopsis lyrata
AL88U10030 0.5kb downstream 0.5kb downstream 500   false scaffold_88: 18581-19080 Arabidopsis lyrata
AL88U10030 1.0kb upstream 1.0kb upstream 3091   true scaffold_88: 19081-22171 Arabidopsis lyrata
AL88U10030 1.0kb upstream 1.0kb upstream 1000   false scaffold_88: 21172-22171 Arabidopsis lyrata
AL88U10030 1.0kb downstream 1.0kb downstream 3091   true scaffold_88: 18081-21171 Arabidopsis lyrata
AL88U10030 1.0kb downstream 1.0kb downstream 1000   false scaffold_88: 18081-19080 Arabidopsis lyrata
AL88U10030 2.0kb upstream 2.0kb upstream 4091   true scaffold_88: 19081-23171 Arabidopsis lyrata
AL88U10030 2.0kb upstream 2.0kb upstream 2000   false scaffold_88: 21172-23171 Arabidopsis lyrata
AL88U10030 2.0kb downstream 2.0kb downstream 4091   true scaffold_88: 17081-21171 Arabidopsis lyrata
AL88U10030 2.0kb downstream 2.0kb downstream 2000   false scaffold_88: 17081-19080 Arabidopsis lyrata
AL88U10030 5.0kb upstream 5.0kb upstream 5067   true scaffold_88: 19081-24147 Arabidopsis lyrata
AL88U10030 5.0kb upstream 5.0kb upstream 2976   false scaffold_88: 21172-24147 Arabidopsis lyrata
AL88U10030 5.0kb downstream 5.0kb downstream 7091   true scaffold_88: 14081-21171 Arabidopsis lyrata
AL88U10030 5.0kb downstream 5.0kb downstream 5000   false scaffold_88: 14081-19080 Arabidopsis lyrata
AL88U10030 10.0kb upstream 10.0kb upstream 5067   true scaffold_88: 19081-24147 Arabidopsis lyrata
AL88U10030 10.0kb upstream 10.0kb upstream 2976   false scaffold_88: 21172-24147 Arabidopsis lyrata
AL88U10030 10.0kb downstream 10.0kb downstream 12091   true scaffold_88: 9081-21171 Arabidopsis lyrata
AL88U10030 10.0kb downstream 10.0kb downstream 10000   false scaffold_88: 9081-19080 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375894 5261 Brassicaceae View MSA
123840462 5264 Brassicales-Malvales View MSA
124351513 5266 SBM View MSA
124248070 5268 Malvidae View MSA
124071029 5270 Rosid View MSA
123742538 5271 Pentapetalae View MSA
122794267 5272 Eudicot View MSA
122043196 5273 Angiosperm View MSA
121347850 5274 Embryophyte View MSA
123380651 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain