Gene : AL7G12600 A. lyrata v2.1

Defline:  (1 of 1) PTHR11062:SF63 - EXOSTOSIN FAMILY PROTEIN Genomic Order:  248
Name:  ? AL7G12600 Secondary Identifier:  ? PAC:35939731

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5980 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL7G12600 0.5kb upstream 0.5kb upstream 2645   true scaffold_7: 963619-966263 Arabidopsis lyrata
AL7G12600 0.5kb upstream 0.5kb upstream 500   false scaffold_7: 965764-966263 Arabidopsis lyrata
AL7G12600 0.5kb downstream 0.5kb downstream 2645   true scaffold_7: 963119-965763 Arabidopsis lyrata
AL7G12600 0.5kb downstream 0.5kb downstream 500   false scaffold_7: 963119-963618 Arabidopsis lyrata
AL7G12600 1.0kb upstream 1.0kb upstream 3145   true scaffold_7: 963619-966763 Arabidopsis lyrata
AL7G12600 1.0kb upstream 1.0kb upstream 1000   false scaffold_7: 965764-966763 Arabidopsis lyrata
AL7G12600 1.0kb downstream 1.0kb downstream 3145   true scaffold_7: 962619-965763 Arabidopsis lyrata
AL7G12600 1.0kb downstream 1.0kb downstream 1000   false scaffold_7: 962619-963618 Arabidopsis lyrata
AL7G12600 2.0kb upstream 2.0kb upstream 4145   true scaffold_7: 963619-967763 Arabidopsis lyrata
AL7G12600 2.0kb upstream 2.0kb upstream 2000   false scaffold_7: 965764-967763 Arabidopsis lyrata
AL7G12600 2.0kb downstream 2.0kb downstream 4145   true scaffold_7: 961619-965763 Arabidopsis lyrata
AL7G12600 2.0kb downstream 2.0kb downstream 2000   false scaffold_7: 961619-963618 Arabidopsis lyrata
AL7G12600 5.0kb upstream 5.0kb upstream 7145   true scaffold_7: 963619-970763 Arabidopsis lyrata
AL7G12600 5.0kb upstream 5.0kb upstream 5000   false scaffold_7: 965764-970763 Arabidopsis lyrata
AL7G12600 5.0kb downstream 5.0kb downstream 7145   true scaffold_7: 958619-965763 Arabidopsis lyrata
AL7G12600 5.0kb downstream 5.0kb downstream 5000   false scaffold_7: 958619-963618 Arabidopsis lyrata
AL7G12600 10.0kb upstream 10.0kb upstream 12145   true scaffold_7: 963619-975763 Arabidopsis lyrata
AL7G12600 10.0kb upstream 10.0kb upstream 10000   false scaffold_7: 965764-975763 Arabidopsis lyrata
AL7G12600 10.0kb downstream 10.0kb downstream 12145   true scaffold_7: 953619-965763 Arabidopsis lyrata
AL7G12600 10.0kb downstream 10.0kb downstream 10000   false scaffold_7: 953619-963618 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369727 5261 Brassicaceae View MSA
123834330 5264 Brassicales-Malvales View MSA
124350181 5266 SBM View MSA
124254213 5268 Malvidae View MSA
124072198 5270 Rosid View MSA
123751032 5271 Pentapetalae View MSA
122797278 5272 Eudicot View MSA
122050562 5273 Angiosperm View MSA
121350610 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain