Gene : AL7G12240 A. lyrata v2.1

Defline:  (1 of 1) PTHR10992//PTHR10992:SF792 - ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  214
Name:  ? AL7G12240 Secondary Identifier:  ? PAC:35938640

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata LIPAS-PWY Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL7G12240 0.5kb upstream 0.5kb upstream 2233   true scaffold_7: 849268-851500 Arabidopsis lyrata
AL7G12240 0.5kb upstream 0.5kb upstream 500   false scaffold_7: 849268-849767 Arabidopsis lyrata
AL7G12240 0.5kb downstream 0.5kb downstream 2233   true scaffold_7: 849768-852000 Arabidopsis lyrata
AL7G12240 0.5kb downstream 0.5kb downstream 500   false scaffold_7: 851501-852000 Arabidopsis lyrata
AL7G12240 1.0kb upstream 1.0kb upstream 2733   true scaffold_7: 848768-851500 Arabidopsis lyrata
AL7G12240 1.0kb upstream 1.0kb upstream 1000   false scaffold_7: 848768-849767 Arabidopsis lyrata
AL7G12240 1.0kb downstream 1.0kb downstream 2733   true scaffold_7: 849768-852500 Arabidopsis lyrata
AL7G12240 1.0kb downstream 1.0kb downstream 1000   false scaffold_7: 851501-852500 Arabidopsis lyrata
AL7G12240 2.0kb upstream 2.0kb upstream 3733   true scaffold_7: 847768-851500 Arabidopsis lyrata
AL7G12240 2.0kb upstream 2.0kb upstream 2000   false scaffold_7: 847768-849767 Arabidopsis lyrata
AL7G12240 2.0kb downstream 2.0kb downstream 3733   true scaffold_7: 849768-853500 Arabidopsis lyrata
AL7G12240 2.0kb downstream 2.0kb downstream 2000   false scaffold_7: 851501-853500 Arabidopsis lyrata
AL7G12240 5.0kb upstream 5.0kb upstream 6733   true scaffold_7: 844768-851500 Arabidopsis lyrata
AL7G12240 5.0kb upstream 5.0kb upstream 5000   false scaffold_7: 844768-849767 Arabidopsis lyrata
AL7G12240 5.0kb downstream 5.0kb downstream 6733   true scaffold_7: 849768-856500 Arabidopsis lyrata
AL7G12240 5.0kb downstream 5.0kb downstream 5000   false scaffold_7: 851501-856500 Arabidopsis lyrata
AL7G12240 10.0kb upstream 10.0kb upstream 11733   true scaffold_7: 839768-851500 Arabidopsis lyrata
AL7G12240 10.0kb upstream 10.0kb upstream 10000   false scaffold_7: 839768-849767 Arabidopsis lyrata
AL7G12240 10.0kb downstream 10.0kb downstream 11733   true scaffold_7: 849768-861500 Arabidopsis lyrata
AL7G12240 10.0kb downstream 10.0kb downstream 10000   false scaffold_7: 851501-861500 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367140 5261 Brassicaceae View MSA
123841298 5264 Brassicales-Malvales View MSA
124342133 5266 SBM View MSA
124239723 5268 Malvidae View MSA
124070444 5270 Rosid View MSA
123749753 5271 Pentapetalae View MSA
122790165 5272 Eudicot View MSA
122050369 5273 Angiosperm View MSA
123428977 5275 Viridiplantae View MSA
121351643 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain