Gene : AL7G11340 A. lyrata v2.1

Defline:  (1 of 4) 2.4.1.29 - Cellulose synthase (GDP-forming) / GDP-glucose-cellulose glucosyltransferase Genomic Order:  129
Name:  ? AL7G11340 Secondary Identifier:  ? PAC:35937309

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-1001 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL7G11340 0.5kb upstream 0.5kb upstream 6169   true scaffold_7: 496440-502608 Arabidopsis lyrata
AL7G11340 0.5kb upstream 0.5kb upstream 500   false scaffold_7: 496440-496939 Arabidopsis lyrata
AL7G11340 0.5kb downstream 0.5kb downstream 6169   true scaffold_7: 496940-503108 Arabidopsis lyrata
AL7G11340 0.5kb downstream 0.5kb downstream 500   false scaffold_7: 502609-503108 Arabidopsis lyrata
AL7G11340 1.0kb upstream 1.0kb upstream 6669   true scaffold_7: 495940-502608 Arabidopsis lyrata
AL7G11340 1.0kb upstream 1.0kb upstream 1000   false scaffold_7: 495940-496939 Arabidopsis lyrata
AL7G11340 1.0kb downstream 1.0kb downstream 6669   true scaffold_7: 496940-503608 Arabidopsis lyrata
AL7G11340 1.0kb downstream 1.0kb downstream 1000   false scaffold_7: 502609-503608 Arabidopsis lyrata
AL7G11340 2.0kb upstream 2.0kb upstream 7669   true scaffold_7: 494940-502608 Arabidopsis lyrata
AL7G11340 2.0kb upstream 2.0kb upstream 2000   false scaffold_7: 494940-496939 Arabidopsis lyrata
AL7G11340 2.0kb downstream 2.0kb downstream 7669   true scaffold_7: 496940-504608 Arabidopsis lyrata
AL7G11340 2.0kb downstream 2.0kb downstream 2000   false scaffold_7: 502609-504608 Arabidopsis lyrata
AL7G11340 5.0kb upstream 5.0kb upstream 10669   true scaffold_7: 491940-502608 Arabidopsis lyrata
AL7G11340 5.0kb upstream 5.0kb upstream 5000   false scaffold_7: 491940-496939 Arabidopsis lyrata
AL7G11340 5.0kb downstream 5.0kb downstream 10669   true scaffold_7: 496940-507608 Arabidopsis lyrata
AL7G11340 5.0kb downstream 5.0kb downstream 5000   false scaffold_7: 502609-507608 Arabidopsis lyrata
AL7G11340 10.0kb upstream 10.0kb upstream 15669   true scaffold_7: 486940-502608 Arabidopsis lyrata
AL7G11340 10.0kb upstream 10.0kb upstream 10000   false scaffold_7: 486940-496939 Arabidopsis lyrata
AL7G11340 10.0kb downstream 10.0kb downstream 15669   true scaffold_7: 496940-512608 Arabidopsis lyrata
AL7G11340 10.0kb downstream 10.0kb downstream 10000   false scaffold_7: 502609-512608 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377328 5261 Brassicaceae View MSA
123839580 5264 Brassicales-Malvales View MSA
124351037 5266 SBM View MSA
124248532 5268 Malvidae View MSA
124071949 5270 Rosid View MSA
123747849 5271 Pentapetalae View MSA
122795199 5272 Eudicot View MSA
122048668 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain