Gene : AL7G12460 A. lyrata v2.1

Defline:  (1 of 3) PTHR31969:SF4 - GEM-LIKE PROTEIN 1-RELATED Genomic Order:  233
Name:  ? AL7G12460 Secondary Identifier:  ? PAC:35936899

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL7G12460 0.5kb upstream 0.5kb upstream 2201   true scaffold_7: 918228-920428 Arabidopsis lyrata
AL7G12460 0.5kb upstream 0.5kb upstream 500   false scaffold_7: 918228-918727 Arabidopsis lyrata
AL7G12460 0.5kb downstream 0.5kb downstream 2201   true scaffold_7: 918728-920928 Arabidopsis lyrata
AL7G12460 0.5kb downstream 0.5kb downstream 500   false scaffold_7: 920429-920928 Arabidopsis lyrata
AL7G12460 1.0kb upstream 1.0kb upstream 2701   true scaffold_7: 917728-920428 Arabidopsis lyrata
AL7G12460 1.0kb upstream 1.0kb upstream 1000   false scaffold_7: 917728-918727 Arabidopsis lyrata
AL7G12460 1.0kb downstream 1.0kb downstream 2701   true scaffold_7: 918728-921428 Arabidopsis lyrata
AL7G12460 1.0kb downstream 1.0kb downstream 1000   false scaffold_7: 920429-921428 Arabidopsis lyrata
AL7G12460 2.0kb upstream 2.0kb upstream 3701   true scaffold_7: 916728-920428 Arabidopsis lyrata
AL7G12460 2.0kb upstream 2.0kb upstream 2000   false scaffold_7: 916728-918727 Arabidopsis lyrata
AL7G12460 2.0kb downstream 2.0kb downstream 3701   true scaffold_7: 918728-922428 Arabidopsis lyrata
AL7G12460 2.0kb downstream 2.0kb downstream 2000   false scaffold_7: 920429-922428 Arabidopsis lyrata
AL7G12460 5.0kb upstream 5.0kb upstream 6701   true scaffold_7: 913728-920428 Arabidopsis lyrata
AL7G12460 5.0kb upstream 5.0kb upstream 5000   false scaffold_7: 913728-918727 Arabidopsis lyrata
AL7G12460 5.0kb downstream 5.0kb downstream 6701   true scaffold_7: 918728-925428 Arabidopsis lyrata
AL7G12460 5.0kb downstream 5.0kb downstream 5000   false scaffold_7: 920429-925428 Arabidopsis lyrata
AL7G12460 10.0kb upstream 10.0kb upstream 11701   true scaffold_7: 908728-920428 Arabidopsis lyrata
AL7G12460 10.0kb upstream 10.0kb upstream 10000   false scaffold_7: 908728-918727 Arabidopsis lyrata
AL7G12460 10.0kb downstream 10.0kb downstream 11701   true scaffold_7: 918728-930428 Arabidopsis lyrata
AL7G12460 10.0kb downstream 10.0kb downstream 10000   false scaffold_7: 920429-930428 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376628 5261 Brassicaceae View MSA
123832178 5264 Brassicales-Malvales View MSA
124341119 5266 SBM View MSA
124243779 5268 Malvidae View MSA
124073004 5270 Rosid View MSA
123738437 5271 Pentapetalae View MSA
122790242 5272 Eudicot View MSA
122050342 5273 Angiosperm View MSA
121350470 5274 Embryophyte View MSA
123381748 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain