Gene : AL7G10160 A. lyrata v2.1

Defline:  (1 of 1) K00726 - alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (MGAT1) Genomic Order:  15
Name:  ? AL7G10160 Secondary Identifier:  ? PAC:35939164

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-7426 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL7G10160 0.5kb upstream 0.5kb upstream 4025   true scaffold_7: 54957-58981 Arabidopsis lyrata
AL7G10160 0.5kb upstream 0.5kb upstream 500   false scaffold_7: 58482-58981 Arabidopsis lyrata
AL7G10160 0.5kb downstream 0.5kb downstream 4025   true scaffold_7: 54457-58481 Arabidopsis lyrata
AL7G10160 0.5kb downstream 0.5kb downstream 500   false scaffold_7: 54457-54956 Arabidopsis lyrata
AL7G10160 1.0kb upstream 1.0kb upstream 4525   true scaffold_7: 54957-59481 Arabidopsis lyrata
AL7G10160 1.0kb upstream 1.0kb upstream 1000   false scaffold_7: 58482-59481 Arabidopsis lyrata
AL7G10160 1.0kb downstream 1.0kb downstream 4525   true scaffold_7: 53957-58481 Arabidopsis lyrata
AL7G10160 1.0kb downstream 1.0kb downstream 1000   false scaffold_7: 53957-54956 Arabidopsis lyrata
AL7G10160 2.0kb upstream 2.0kb upstream 5525   true scaffold_7: 54957-60481 Arabidopsis lyrata
AL7G10160 2.0kb upstream 2.0kb upstream 2000   false scaffold_7: 58482-60481 Arabidopsis lyrata
AL7G10160 2.0kb downstream 2.0kb downstream 5525   true scaffold_7: 52957-58481 Arabidopsis lyrata
AL7G10160 2.0kb downstream 2.0kb downstream 2000   false scaffold_7: 52957-54956 Arabidopsis lyrata
AL7G10160 5.0kb upstream 5.0kb upstream 8525   true scaffold_7: 54957-63481 Arabidopsis lyrata
AL7G10160 5.0kb upstream 5.0kb upstream 5000   false scaffold_7: 58482-63481 Arabidopsis lyrata
AL7G10160 5.0kb downstream 5.0kb downstream 8525   true scaffold_7: 49957-58481 Arabidopsis lyrata
AL7G10160 5.0kb downstream 5.0kb downstream 5000   false scaffold_7: 49957-54956 Arabidopsis lyrata
AL7G10160 10.0kb upstream 10.0kb upstream 13525   true scaffold_7: 54957-68481 Arabidopsis lyrata
AL7G10160 10.0kb upstream 10.0kb upstream 10000   false scaffold_7: 58482-68481 Arabidopsis lyrata
AL7G10160 10.0kb downstream 10.0kb downstream 13525   true scaffold_7: 44957-58481 Arabidopsis lyrata
AL7G10160 10.0kb downstream 10.0kb downstream 10000   false scaffold_7: 44957-54956 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371542 5261 Brassicaceae View MSA
123831005 5264 Brassicales-Malvales View MSA
124342265 5266 SBM View MSA
124241917 5268 Malvidae View MSA
124064877 5270 Rosid View MSA
123753422 5271 Pentapetalae View MSA
122787194 5272 Eudicot View MSA
122050416 5273 Angiosperm View MSA
121350019 5274 Embryophyte View MSA
123426685 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain