Gene : AL7G19900 A. lyrata v2.1

Defline:  (1 of 1) K00811 - aspartate aminotransferase, chloroplastic (ASP5) Genomic Order:  952
Name:  ? AL7G19900 Secondary Identifier:  ? PAC:35938325

Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata ASPARTATE-DEG1-PWY Arabidopsis lyrata pathologic  
Alyrata ASPARTATESYN-PWY Arabidopsis lyrata pathologic  
Alyrata PWY-3001 Arabidopsis lyrata pathologic  
Alyrata PWY-7115 Arabidopsis lyrata pathologic  
Alyrata PWY-7117 Arabidopsis lyrata pathologic  
Alyrata THRESYN-PWY Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL7G19900 0.5kb upstream 0.5kb upstream 3556   true scaffold_7: 4062683-4066238 Arabidopsis lyrata
AL7G19900 0.5kb upstream 0.5kb upstream 500   false scaffold_7: 4062683-4063182 Arabidopsis lyrata
AL7G19900 0.5kb downstream 0.5kb downstream 3556   true scaffold_7: 4063183-4066738 Arabidopsis lyrata
AL7G19900 0.5kb downstream 0.5kb downstream 500   false scaffold_7: 4066239-4066738 Arabidopsis lyrata
AL7G19900 1.0kb upstream 1.0kb upstream 4056   true scaffold_7: 4062183-4066238 Arabidopsis lyrata
AL7G19900 1.0kb upstream 1.0kb upstream 1000   false scaffold_7: 4062183-4063182 Arabidopsis lyrata
AL7G19900 1.0kb downstream 1.0kb downstream 4056   true scaffold_7: 4063183-4067238 Arabidopsis lyrata
AL7G19900 1.0kb downstream 1.0kb downstream 1000   false scaffold_7: 4066239-4067238 Arabidopsis lyrata
AL7G19900 2.0kb upstream 2.0kb upstream 5056   true scaffold_7: 4061183-4066238 Arabidopsis lyrata
AL7G19900 2.0kb upstream 2.0kb upstream 2000   false scaffold_7: 4061183-4063182 Arabidopsis lyrata
AL7G19900 2.0kb downstream 2.0kb downstream 5056   true scaffold_7: 4063183-4068238 Arabidopsis lyrata
AL7G19900 2.0kb downstream 2.0kb downstream 2000   false scaffold_7: 4066239-4068238 Arabidopsis lyrata
AL7G19900 5.0kb upstream 5.0kb upstream 8056   true scaffold_7: 4058183-4066238 Arabidopsis lyrata
AL7G19900 5.0kb upstream 5.0kb upstream 5000   false scaffold_7: 4058183-4063182 Arabidopsis lyrata
AL7G19900 5.0kb downstream 5.0kb downstream 8056   true scaffold_7: 4063183-4071238 Arabidopsis lyrata
AL7G19900 5.0kb downstream 5.0kb downstream 5000   false scaffold_7: 4066239-4071238 Arabidopsis lyrata
AL7G19900 10.0kb upstream 10.0kb upstream 13056   true scaffold_7: 4053183-4066238 Arabidopsis lyrata
AL7G19900 10.0kb upstream 10.0kb upstream 10000   false scaffold_7: 4053183-4063182 Arabidopsis lyrata
AL7G19900 10.0kb downstream 10.0kb downstream 13056   true scaffold_7: 4063183-4076238 Arabidopsis lyrata
AL7G19900 10.0kb downstream 10.0kb downstream 10000   false scaffold_7: 4066239-4076238 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376883 5261 Brassicaceae View MSA
123833369 5264 Brassicales-Malvales View MSA
124341327 5266 SBM View MSA
124241276 5268 Malvidae View MSA
124066749 5270 Rosid View MSA
123740507 5271 Pentapetalae View MSA
122797537 5272 Eudicot View MSA
122048100 5273 Angiosperm View MSA
121346908 5274 Embryophyte View MSA
123424622 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain