Gene : AL7G20170 A. lyrata v2.1

Defline:  (1 of 1) PTHR11941:SF96 - 3-HYDROXYISOBUTYRYL-COA HYDROLASE-LIKE PROTEIN 2, MITOCHONDRIAL Genomic Order:  975
Name:  ? AL7G20170 Secondary Identifier:  ? PAC:35938342

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-7574 Arabidopsis lyrata pathologic  
Alyrata VALDEG-PWY Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL7G20170 0.5kb upstream 0.5kb upstream 3925   true scaffold_7: 4166927-4170851 Arabidopsis lyrata
AL7G20170 0.5kb upstream 0.5kb upstream 500   false scaffold_7: 4166927-4167426 Arabidopsis lyrata
AL7G20170 0.5kb downstream 0.5kb downstream 3925   true scaffold_7: 4167427-4171351 Arabidopsis lyrata
AL7G20170 0.5kb downstream 0.5kb downstream 500   false scaffold_7: 4170852-4171351 Arabidopsis lyrata
AL7G20170 1.0kb upstream 1.0kb upstream 4425   true scaffold_7: 4166427-4170851 Arabidopsis lyrata
AL7G20170 1.0kb upstream 1.0kb upstream 1000   false scaffold_7: 4166427-4167426 Arabidopsis lyrata
AL7G20170 1.0kb downstream 1.0kb downstream 4425   true scaffold_7: 4167427-4171851 Arabidopsis lyrata
AL7G20170 1.0kb downstream 1.0kb downstream 1000   false scaffold_7: 4170852-4171851 Arabidopsis lyrata
AL7G20170 2.0kb upstream 2.0kb upstream 5425   true scaffold_7: 4165427-4170851 Arabidopsis lyrata
AL7G20170 2.0kb upstream 2.0kb upstream 2000   false scaffold_7: 4165427-4167426 Arabidopsis lyrata
AL7G20170 2.0kb downstream 2.0kb downstream 5425   true scaffold_7: 4167427-4172851 Arabidopsis lyrata
AL7G20170 2.0kb downstream 2.0kb downstream 2000   false scaffold_7: 4170852-4172851 Arabidopsis lyrata
AL7G20170 5.0kb upstream 5.0kb upstream 8425   true scaffold_7: 4162427-4170851 Arabidopsis lyrata
AL7G20170 5.0kb upstream 5.0kb upstream 5000   false scaffold_7: 4162427-4167426 Arabidopsis lyrata
AL7G20170 5.0kb downstream 5.0kb downstream 8425   true scaffold_7: 4167427-4175851 Arabidopsis lyrata
AL7G20170 5.0kb downstream 5.0kb downstream 5000   false scaffold_7: 4170852-4175851 Arabidopsis lyrata
AL7G20170 10.0kb upstream 10.0kb upstream 13425   true scaffold_7: 4157427-4170851 Arabidopsis lyrata
AL7G20170 10.0kb upstream 10.0kb upstream 10000   false scaffold_7: 4157427-4167426 Arabidopsis lyrata
AL7G20170 10.0kb downstream 10.0kb downstream 13425   true scaffold_7: 4167427-4180851 Arabidopsis lyrata
AL7G20170 10.0kb downstream 10.0kb downstream 10000   false scaffold_7: 4170852-4180851 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367872 5261 Brassicaceae View MSA
123831768 5264 Brassicales-Malvales View MSA
124345113 5266 SBM View MSA
124241889 5268 Malvidae View MSA
124062114 5270 Rosid View MSA
123739343 5271 Pentapetalae View MSA
122794700 5272 Eudicot View MSA
122041951 5273 Angiosperm View MSA
121350478 5274 Embryophyte View MSA
123428448 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain