Gene : AL7G18880 A. lyrata v2.1

Defline:  (1 of 7) K00850 - 6-phosphofructokinase 1 (pfkA, PFK) Genomic Order:  856
Name:  ? AL7G18880 Secondary Identifier:  ? PAC:35936446

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata ANAEROFRUCAT-PWY Arabidopsis lyrata pathologic  
Alyrata ANAGLYCOLYSIS-PWY Arabidopsis lyrata pathologic  
Alyrata PWY-1042 Arabidopsis lyrata pathologic  
Alyrata PWY-5464 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL7G18880 0.5kb upstream 0.5kb upstream 4465   true scaffold_7: 3590431-3594895 Arabidopsis lyrata
AL7G18880 0.5kb upstream 0.5kb upstream 500   false scaffold_7: 3590431-3590930 Arabidopsis lyrata
AL7G18880 0.5kb downstream 0.5kb downstream 4465   true scaffold_7: 3590931-3595395 Arabidopsis lyrata
AL7G18880 0.5kb downstream 0.5kb downstream 500   false scaffold_7: 3594896-3595395 Arabidopsis lyrata
AL7G18880 1.0kb upstream 1.0kb upstream 4965   true scaffold_7: 3589931-3594895 Arabidopsis lyrata
AL7G18880 1.0kb upstream 1.0kb upstream 1000   false scaffold_7: 3589931-3590930 Arabidopsis lyrata
AL7G18880 1.0kb downstream 1.0kb downstream 4965   true scaffold_7: 3590931-3595895 Arabidopsis lyrata
AL7G18880 1.0kb downstream 1.0kb downstream 1000   false scaffold_7: 3594896-3595895 Arabidopsis lyrata
AL7G18880 2.0kb upstream 2.0kb upstream 5965   true scaffold_7: 3588931-3594895 Arabidopsis lyrata
AL7G18880 2.0kb upstream 2.0kb upstream 2000   false scaffold_7: 3588931-3590930 Arabidopsis lyrata
AL7G18880 2.0kb downstream 2.0kb downstream 5965   true scaffold_7: 3590931-3596895 Arabidopsis lyrata
AL7G18880 2.0kb downstream 2.0kb downstream 2000   false scaffold_7: 3594896-3596895 Arabidopsis lyrata
AL7G18880 5.0kb upstream 5.0kb upstream 8965   true scaffold_7: 3585931-3594895 Arabidopsis lyrata
AL7G18880 5.0kb upstream 5.0kb upstream 5000   false scaffold_7: 3585931-3590930 Arabidopsis lyrata
AL7G18880 5.0kb downstream 5.0kb downstream 8965   true scaffold_7: 3590931-3599895 Arabidopsis lyrata
AL7G18880 5.0kb downstream 5.0kb downstream 5000   false scaffold_7: 3594896-3599895 Arabidopsis lyrata
AL7G18880 10.0kb upstream 10.0kb upstream 13965   true scaffold_7: 3580931-3594895 Arabidopsis lyrata
AL7G18880 10.0kb upstream 10.0kb upstream 10000   false scaffold_7: 3580931-3590930 Arabidopsis lyrata
AL7G18880 10.0kb downstream 10.0kb downstream 13965   true scaffold_7: 3590931-3604895 Arabidopsis lyrata
AL7G18880 10.0kb downstream 10.0kb downstream 10000   false scaffold_7: 3594896-3604895 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041124 5273 Angiosperm View MSA
122367046 5261 Brassicaceae View MSA
123799285 5264 Brassicales-Malvales View MSA
124296821 5266 SBM View MSA
124246868 5268 Malvidae View MSA
124069245 5270 Rosid View MSA
123747020 5271 Pentapetalae View MSA
122788773 5272 Eudicot View MSA
121349898 5274 Embryophyte View MSA
123428795 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain