Gene : AL7G17710 A. lyrata v2.1

Defline:  (1 of 1) PTHR22594:SF5 - ASPARTATE--TRNA LIGASE, MITOCHONDRIAL Genomic Order:  743
Name:  ? AL7G17710 Secondary Identifier:  ? PAC:35938093

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata TRNA-CHARGING-PWY Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL7G17710 0.5kb upstream 0.5kb upstream 4647   true scaffold_7: 3136616-3141262 Arabidopsis lyrata
AL7G17710 0.5kb upstream 0.5kb upstream 500   false scaffold_7: 3136616-3137115 Arabidopsis lyrata
AL7G17710 0.5kb downstream 0.5kb downstream 4647   true scaffold_7: 3137116-3141762 Arabidopsis lyrata
AL7G17710 0.5kb downstream 0.5kb downstream 500   false scaffold_7: 3141263-3141762 Arabidopsis lyrata
AL7G17710 1.0kb upstream 1.0kb upstream 5147   true scaffold_7: 3136116-3141262 Arabidopsis lyrata
AL7G17710 1.0kb upstream 1.0kb upstream 1000   false scaffold_7: 3136116-3137115 Arabidopsis lyrata
AL7G17710 1.0kb downstream 1.0kb downstream 5147   true scaffold_7: 3137116-3142262 Arabidopsis lyrata
AL7G17710 1.0kb downstream 1.0kb downstream 1000   false scaffold_7: 3141263-3142262 Arabidopsis lyrata
AL7G17710 2.0kb upstream 2.0kb upstream 6147   true scaffold_7: 3135116-3141262 Arabidopsis lyrata
AL7G17710 2.0kb upstream 2.0kb upstream 2000   false scaffold_7: 3135116-3137115 Arabidopsis lyrata
AL7G17710 2.0kb downstream 2.0kb downstream 6147   true scaffold_7: 3137116-3143262 Arabidopsis lyrata
AL7G17710 2.0kb downstream 2.0kb downstream 2000   false scaffold_7: 3141263-3143262 Arabidopsis lyrata
AL7G17710 5.0kb upstream 5.0kb upstream 9147   true scaffold_7: 3132116-3141262 Arabidopsis lyrata
AL7G17710 5.0kb upstream 5.0kb upstream 5000   false scaffold_7: 3132116-3137115 Arabidopsis lyrata
AL7G17710 5.0kb downstream 5.0kb downstream 9147   true scaffold_7: 3137116-3146262 Arabidopsis lyrata
AL7G17710 5.0kb downstream 5.0kb downstream 5000   false scaffold_7: 3141263-3146262 Arabidopsis lyrata
AL7G17710 10.0kb upstream 10.0kb upstream 14147   true scaffold_7: 3127116-3141262 Arabidopsis lyrata
AL7G17710 10.0kb upstream 10.0kb upstream 10000   false scaffold_7: 3127116-3137115 Arabidopsis lyrata
AL7G17710 10.0kb downstream 10.0kb downstream 14147   true scaffold_7: 3137116-3151262 Arabidopsis lyrata
AL7G17710 10.0kb downstream 10.0kb downstream 10000   false scaffold_7: 3141263-3151262 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368024 5261 Brassicaceae View MSA
123833366 5264 Brassicales-Malvales View MSA
124350265 5266 SBM View MSA
124243191 5268 Malvidae View MSA
124067030 5270 Rosid View MSA
123742204 5271 Pentapetalae View MSA
122792299 5272 Eudicot View MSA
122041718 5273 Angiosperm View MSA
121346039 5274 Embryophyte View MSA
123424871 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain