Gene : AL7G17800 A. lyrata v2.1

Defline:  (1 of 2) 2.6.1.83 - LL-diaminopimelate aminotransferase / LL-diaminopimelate transaminase Genomic Order:  752
Name:  ? AL7G17800 Secondary Identifier:  ? PAC:35937006

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5097 Arabidopsis lyrata pathologic  
Alyrata PWY-724 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL7G17800 0.5kb upstream 0.5kb upstream 3438   true scaffold_7: 3162166-3165603 Arabidopsis lyrata
AL7G17800 0.5kb upstream 0.5kb upstream 500   false scaffold_7: 3162166-3162665 Arabidopsis lyrata
AL7G17800 0.5kb downstream 0.5kb downstream 3438   true scaffold_7: 3162666-3166103 Arabidopsis lyrata
AL7G17800 0.5kb downstream 0.5kb downstream 500   false scaffold_7: 3165604-3166103 Arabidopsis lyrata
AL7G17800 1.0kb upstream 1.0kb upstream 3938   true scaffold_7: 3161666-3165603 Arabidopsis lyrata
AL7G17800 1.0kb upstream 1.0kb upstream 1000   false scaffold_7: 3161666-3162665 Arabidopsis lyrata
AL7G17800 1.0kb downstream 1.0kb downstream 3938   true scaffold_7: 3162666-3166603 Arabidopsis lyrata
AL7G17800 1.0kb downstream 1.0kb downstream 1000   false scaffold_7: 3165604-3166603 Arabidopsis lyrata
AL7G17800 2.0kb upstream 2.0kb upstream 4938   true scaffold_7: 3160666-3165603 Arabidopsis lyrata
AL7G17800 2.0kb upstream 2.0kb upstream 2000   false scaffold_7: 3160666-3162665 Arabidopsis lyrata
AL7G17800 2.0kb downstream 2.0kb downstream 4938   true scaffold_7: 3162666-3167603 Arabidopsis lyrata
AL7G17800 2.0kb downstream 2.0kb downstream 2000   false scaffold_7: 3165604-3167603 Arabidopsis lyrata
AL7G17800 5.0kb upstream 5.0kb upstream 7938   true scaffold_7: 3157666-3165603 Arabidopsis lyrata
AL7G17800 5.0kb upstream 5.0kb upstream 5000   false scaffold_7: 3157666-3162665 Arabidopsis lyrata
AL7G17800 5.0kb downstream 5.0kb downstream 7938   true scaffold_7: 3162666-3170603 Arabidopsis lyrata
AL7G17800 5.0kb downstream 5.0kb downstream 5000   false scaffold_7: 3165604-3170603 Arabidopsis lyrata
AL7G17800 10.0kb upstream 10.0kb upstream 12938   true scaffold_7: 3152666-3165603 Arabidopsis lyrata
AL7G17800 10.0kb upstream 10.0kb upstream 10000   false scaffold_7: 3152666-3162665 Arabidopsis lyrata
AL7G17800 10.0kb downstream 10.0kb downstream 12938   true scaffold_7: 3162666-3175603 Arabidopsis lyrata
AL7G17800 10.0kb downstream 10.0kb downstream 10000   false scaffold_7: 3165604-3175603 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365639 5261 Brassicaceae View MSA
123833464 5264 Brassicales-Malvales View MSA
124338935 5266 SBM View MSA
124252486 5268 Malvidae View MSA
124071170 5270 Rosid View MSA
123740014 5271 Pentapetalae View MSA
122788260 5272 Eudicot View MSA
122045161 5273 Angiosperm View MSA
121344343 5274 Embryophyte View MSA
123424947 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain