Gene : AL7G17540 A. lyrata v2.1
Defline:  (1 of 5) PF12767 - Transcriptional regulator of RNA polII, SAGA, subunit (SAGA-Tad1) Genomic Order:  726
Name:  ? AL7G17540 Secondary Identifier:  ? PAC:35938211
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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL7G17540 0.5kb upstream 0.5kb upstream 2303   true scaffold_7: 3062009-3064311 Arabidopsis lyrata
AL7G17540 0.5kb upstream 0.5kb upstream 500   false scaffold_7: 3063812-3064311 Arabidopsis lyrata
AL7G17540 0.5kb downstream 0.5kb downstream 2303   true scaffold_7: 3061509-3063811 Arabidopsis lyrata
AL7G17540 0.5kb downstream 0.5kb downstream 500   false scaffold_7: 3061509-3062008 Arabidopsis lyrata
AL7G17540 1.0kb upstream 1.0kb upstream 2803   true scaffold_7: 3062009-3064811 Arabidopsis lyrata
AL7G17540 1.0kb upstream 1.0kb upstream 1000   false scaffold_7: 3063812-3064811 Arabidopsis lyrata
AL7G17540 1.0kb downstream 1.0kb downstream 2803   true scaffold_7: 3061009-3063811 Arabidopsis lyrata
AL7G17540 1.0kb downstream 1.0kb downstream 1000   false scaffold_7: 3061009-3062008 Arabidopsis lyrata
AL7G17540 2.0kb upstream 2.0kb upstream 3803   true scaffold_7: 3062009-3065811 Arabidopsis lyrata
AL7G17540 2.0kb upstream 2.0kb upstream 2000   false scaffold_7: 3063812-3065811 Arabidopsis lyrata
AL7G17540 2.0kb downstream 2.0kb downstream 3803   true scaffold_7: 3060009-3063811 Arabidopsis lyrata
AL7G17540 2.0kb downstream 2.0kb downstream 2000   false scaffold_7: 3060009-3062008 Arabidopsis lyrata
AL7G17540 5.0kb upstream 5.0kb upstream 6803   true scaffold_7: 3062009-3068811 Arabidopsis lyrata
AL7G17540 5.0kb upstream 5.0kb upstream 5000   false scaffold_7: 3063812-3068811 Arabidopsis lyrata
AL7G17540 5.0kb downstream 5.0kb downstream 6803   true scaffold_7: 3057009-3063811 Arabidopsis lyrata
AL7G17540 5.0kb downstream 5.0kb downstream 5000   false scaffold_7: 3057009-3062008 Arabidopsis lyrata
AL7G17540 10.0kb upstream 10.0kb upstream 11803   true scaffold_7: 3062009-3073811 Arabidopsis lyrata
AL7G17540 10.0kb upstream 10.0kb upstream 10000   false scaffold_7: 3063812-3073811 Arabidopsis lyrata
AL7G17540 10.0kb downstream 10.0kb downstream 11803   true scaffold_7: 3052009-3063811 Arabidopsis lyrata
AL7G17540 10.0kb downstream 10.0kb downstream 10000   false scaffold_7: 3052009-3062008 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362161 5261 Brassicaceae View MSA
123834752 5264 Brassicales-Malvales View MSA
124345526 5266 SBM View MSA
124251917 5268 Malvidae View MSA
124060712 5270 Rosid View MSA
123743282 5271 Pentapetalae View MSA
122790089 5272 Eudicot View MSA
122050052 5273 Angiosperm View MSA
121311708 5274 Embryophyte View MSA
123348971 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain