Gene : AL7G17110 A. lyrata v2.1

Defline:  (1 of 4) 1.1.1.95 - Phosphoglycerate dehydrogenase / Phosphoglyceric acid dehydrogenase Genomic Order:  684
Name:  ? AL7G17110 Secondary Identifier:  ? PAC:35936312

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata SER-GLYSYN-PWY Arabidopsis lyrata pathologic  
Alyrata SERSYN-PWY Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL7G17110 0.5kb upstream 0.5kb upstream 3275   true scaffold_7: 2893055-2896329 Arabidopsis lyrata
AL7G17110 0.5kb upstream 0.5kb upstream 500   false scaffold_7: 2893055-2893554 Arabidopsis lyrata
AL7G17110 0.5kb downstream 0.5kb downstream 3275   true scaffold_7: 2893555-2896829 Arabidopsis lyrata
AL7G17110 0.5kb downstream 0.5kb downstream 500   false scaffold_7: 2896330-2896829 Arabidopsis lyrata
AL7G17110 1.0kb upstream 1.0kb upstream 3775   true scaffold_7: 2892555-2896329 Arabidopsis lyrata
AL7G17110 1.0kb upstream 1.0kb upstream 1000   false scaffold_7: 2892555-2893554 Arabidopsis lyrata
AL7G17110 1.0kb downstream 1.0kb downstream 3775   true scaffold_7: 2893555-2897329 Arabidopsis lyrata
AL7G17110 1.0kb downstream 1.0kb downstream 1000   false scaffold_7: 2896330-2897329 Arabidopsis lyrata
AL7G17110 2.0kb upstream 2.0kb upstream 4775   true scaffold_7: 2891555-2896329 Arabidopsis lyrata
AL7G17110 2.0kb upstream 2.0kb upstream 2000   false scaffold_7: 2891555-2893554 Arabidopsis lyrata
AL7G17110 2.0kb downstream 2.0kb downstream 4775   true scaffold_7: 2893555-2898329 Arabidopsis lyrata
AL7G17110 2.0kb downstream 2.0kb downstream 2000   false scaffold_7: 2896330-2898329 Arabidopsis lyrata
AL7G17110 5.0kb upstream 5.0kb upstream 7775   true scaffold_7: 2888555-2896329 Arabidopsis lyrata
AL7G17110 5.0kb upstream 5.0kb upstream 5000   false scaffold_7: 2888555-2893554 Arabidopsis lyrata
AL7G17110 5.0kb downstream 5.0kb downstream 7775   true scaffold_7: 2893555-2901329 Arabidopsis lyrata
AL7G17110 5.0kb downstream 5.0kb downstream 5000   false scaffold_7: 2896330-2901329 Arabidopsis lyrata
AL7G17110 10.0kb upstream 10.0kb upstream 12775   true scaffold_7: 2883555-2896329 Arabidopsis lyrata
AL7G17110 10.0kb upstream 10.0kb upstream 10000   false scaffold_7: 2883555-2893554 Arabidopsis lyrata
AL7G17110 10.0kb downstream 10.0kb downstream 12775   true scaffold_7: 2893555-2906329 Arabidopsis lyrata
AL7G17110 10.0kb downstream 10.0kb downstream 10000   false scaffold_7: 2896330-2906329 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377940 5261 Brassicaceae View MSA
123828170 5264 Brassicales-Malvales View MSA
124344584 5266 SBM View MSA
124245424 5268 Malvidae View MSA
124071894 5270 Rosid View MSA
123750282 5271 Pentapetalae View MSA
122795023 5272 Eudicot View MSA
122044765 5273 Angiosperm View MSA
121347094 5274 Embryophyte View MSA
123427510 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain