Gene : AL7G16780 A. lyrata v2.1

Defline:  (1 of 2) K17267 - coatomer protein complex, subunit gamma (COPG) Genomic Order:  652
Name:  ? AL7G16780 Secondary Identifier:  ? PAC:35939084

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL7G16780 0.5kb upstream 0.5kb upstream 5945   true scaffold_7: 2771972-2777916 Arabidopsis lyrata
AL7G16780 0.5kb upstream 0.5kb upstream 500   false scaffold_7: 2777417-2777916 Arabidopsis lyrata
AL7G16780 0.5kb downstream 0.5kb downstream 5945   true scaffold_7: 2771472-2777416 Arabidopsis lyrata
AL7G16780 0.5kb downstream 0.5kb downstream 500   false scaffold_7: 2771472-2771971 Arabidopsis lyrata
AL7G16780 1.0kb upstream 1.0kb upstream 6445   true scaffold_7: 2771972-2778416 Arabidopsis lyrata
AL7G16780 1.0kb upstream 1.0kb upstream 1000   false scaffold_7: 2777417-2778416 Arabidopsis lyrata
AL7G16780 1.0kb downstream 1.0kb downstream 6445   true scaffold_7: 2770972-2777416 Arabidopsis lyrata
AL7G16780 1.0kb downstream 1.0kb downstream 1000   false scaffold_7: 2770972-2771971 Arabidopsis lyrata
AL7G16780 2.0kb upstream 2.0kb upstream 7445   true scaffold_7: 2771972-2779416 Arabidopsis lyrata
AL7G16780 2.0kb upstream 2.0kb upstream 2000   false scaffold_7: 2777417-2779416 Arabidopsis lyrata
AL7G16780 2.0kb downstream 2.0kb downstream 7445   true scaffold_7: 2769972-2777416 Arabidopsis lyrata
AL7G16780 2.0kb downstream 2.0kb downstream 2000   false scaffold_7: 2769972-2771971 Arabidopsis lyrata
AL7G16780 5.0kb upstream 5.0kb upstream 10445   true scaffold_7: 2771972-2782416 Arabidopsis lyrata
AL7G16780 5.0kb upstream 5.0kb upstream 5000   false scaffold_7: 2777417-2782416 Arabidopsis lyrata
AL7G16780 5.0kb downstream 5.0kb downstream 10445   true scaffold_7: 2766972-2777416 Arabidopsis lyrata
AL7G16780 5.0kb downstream 5.0kb downstream 5000   false scaffold_7: 2766972-2771971 Arabidopsis lyrata
AL7G16780 10.0kb upstream 10.0kb upstream 15445   true scaffold_7: 2771972-2787416 Arabidopsis lyrata
AL7G16780 10.0kb upstream 10.0kb upstream 10000   false scaffold_7: 2777417-2787416 Arabidopsis lyrata
AL7G16780 10.0kb downstream 10.0kb downstream 15445   true scaffold_7: 2761972-2777416 Arabidopsis lyrata
AL7G16780 10.0kb downstream 10.0kb downstream 10000   false scaffold_7: 2761972-2771971 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379128 5261 Brassicaceae View MSA
123831978 5264 Brassicales-Malvales View MSA
124337294 5266 SBM View MSA
124253257 5268 Malvidae View MSA
124064996 5270 Rosid View MSA
123745715 5271 Pentapetalae View MSA
122789783 5272 Eudicot View MSA
122043525 5273 Angiosperm View MSA
121350751 5274 Embryophyte View MSA
123428143 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain