Gene : AL7G15500 A. lyrata v2.1

Defline:  (1 of 2) PTHR23416:SF63 - SERINE ACETYLTRANSFERASE 2-RELATED Genomic Order:  528
Name:  ? AL7G15500 Secondary Identifier:  ? PAC:35937179

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata CYSTSYN-PWY Arabidopsis lyrata pathologic  
Alyrata PWY-6936 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL7G15500 0.5kb upstream 0.5kb upstream 2787   true scaffold_7: 2250057-2252843 Arabidopsis lyrata
AL7G15500 0.5kb upstream 0.5kb upstream 500   false scaffold_7: 2250057-2250556 Arabidopsis lyrata
AL7G15500 0.5kb downstream 0.5kb downstream 2787   true scaffold_7: 2250557-2253343 Arabidopsis lyrata
AL7G15500 0.5kb downstream 0.5kb downstream 500   false scaffold_7: 2252844-2253343 Arabidopsis lyrata
AL7G15500 1.0kb upstream 1.0kb upstream 3287   true scaffold_7: 2249557-2252843 Arabidopsis lyrata
AL7G15500 1.0kb upstream 1.0kb upstream 1000   false scaffold_7: 2249557-2250556 Arabidopsis lyrata
AL7G15500 1.0kb downstream 1.0kb downstream 3287   true scaffold_7: 2250557-2253843 Arabidopsis lyrata
AL7G15500 1.0kb downstream 1.0kb downstream 1000   false scaffold_7: 2252844-2253843 Arabidopsis lyrata
AL7G15500 2.0kb upstream 2.0kb upstream 4287   true scaffold_7: 2248557-2252843 Arabidopsis lyrata
AL7G15500 2.0kb upstream 2.0kb upstream 2000   false scaffold_7: 2248557-2250556 Arabidopsis lyrata
AL7G15500 2.0kb downstream 2.0kb downstream 4287   true scaffold_7: 2250557-2254843 Arabidopsis lyrata
AL7G15500 2.0kb downstream 2.0kb downstream 2000   false scaffold_7: 2252844-2254843 Arabidopsis lyrata
AL7G15500 5.0kb upstream 5.0kb upstream 7287   true scaffold_7: 2245557-2252843 Arabidopsis lyrata
AL7G15500 5.0kb upstream 5.0kb upstream 5000   false scaffold_7: 2245557-2250556 Arabidopsis lyrata
AL7G15500 5.0kb downstream 5.0kb downstream 7287   true scaffold_7: 2250557-2257843 Arabidopsis lyrata
AL7G15500 5.0kb downstream 5.0kb downstream 5000   false scaffold_7: 2252844-2257843 Arabidopsis lyrata
AL7G15500 10.0kb upstream 10.0kb upstream 12287   true scaffold_7: 2240557-2252843 Arabidopsis lyrata
AL7G15500 10.0kb upstream 10.0kb upstream 10000   false scaffold_7: 2240557-2250556 Arabidopsis lyrata
AL7G15500 10.0kb downstream 10.0kb downstream 12287   true scaffold_7: 2250557-2262843 Arabidopsis lyrata
AL7G15500 10.0kb downstream 10.0kb downstream 10000   false scaffold_7: 2252844-2262843 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377353 5261 Brassicaceae View MSA
123838527 5264 Brassicales-Malvales View MSA
124322470 5266 SBM View MSA
124240190 5268 Malvidae View MSA
124063279 5270 Rosid View MSA
123743402 5271 Pentapetalae View MSA
122788102 5272 Eudicot View MSA
122045908 5273 Angiosperm View MSA
121349787 5274 Embryophyte View MSA
123426625 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain