Gene : AL7G15480 A. lyrata v2.1
Defline:  (1 of 11) PF05627 - Cleavage site for pathogenic type III effector avirulence factor Avr (AvrRpt-cleavage) Genomic Order:  526
Name:  ? AL7G15480 Secondary Identifier:  ? PAC:35939850
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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL7G15480 0.5kb upstream 0.5kb upstream 1043   true scaffold_7: 2242984-2244026 Arabidopsis lyrata
AL7G15480 0.5kb upstream 0.5kb upstream 500   false scaffold_7: 2243527-2244026 Arabidopsis lyrata
AL7G15480 0.5kb downstream 0.5kb downstream 1043   true scaffold_7: 2242484-2243526 Arabidopsis lyrata
AL7G15480 0.5kb downstream 0.5kb downstream 500   false scaffold_7: 2242484-2242983 Arabidopsis lyrata
AL7G15480 1.0kb upstream 1.0kb upstream 1543   true scaffold_7: 2242984-2244526 Arabidopsis lyrata
AL7G15480 1.0kb upstream 1.0kb upstream 1000   false scaffold_7: 2243527-2244526 Arabidopsis lyrata
AL7G15480 1.0kb downstream 1.0kb downstream 1543   true scaffold_7: 2241984-2243526 Arabidopsis lyrata
AL7G15480 1.0kb downstream 1.0kb downstream 1000   false scaffold_7: 2241984-2242983 Arabidopsis lyrata
AL7G15480 2.0kb upstream 2.0kb upstream 2543   true scaffold_7: 2242984-2245526 Arabidopsis lyrata
AL7G15480 2.0kb upstream 2.0kb upstream 2000   false scaffold_7: 2243527-2245526 Arabidopsis lyrata
AL7G15480 2.0kb downstream 2.0kb downstream 2543   true scaffold_7: 2240984-2243526 Arabidopsis lyrata
AL7G15480 2.0kb downstream 2.0kb downstream 2000   false scaffold_7: 2240984-2242983 Arabidopsis lyrata
AL7G15480 5.0kb upstream 5.0kb upstream 5543   true scaffold_7: 2242984-2248526 Arabidopsis lyrata
AL7G15480 5.0kb upstream 5.0kb upstream 5000   false scaffold_7: 2243527-2248526 Arabidopsis lyrata
AL7G15480 5.0kb downstream 5.0kb downstream 5543   true scaffold_7: 2237984-2243526 Arabidopsis lyrata
AL7G15480 5.0kb downstream 5.0kb downstream 5000   false scaffold_7: 2237984-2242983 Arabidopsis lyrata
AL7G15480 10.0kb upstream 10.0kb upstream 10543   true scaffold_7: 2242984-2253526 Arabidopsis lyrata
AL7G15480 10.0kb upstream 10.0kb upstream 10000   false scaffold_7: 2243527-2253526 Arabidopsis lyrata
AL7G15480 10.0kb downstream 10.0kb downstream 10543   true scaffold_7: 2232984-2243526 Arabidopsis lyrata
AL7G15480 10.0kb downstream 10.0kb downstream 10000   false scaffold_7: 2232984-2242983 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377241 5261 Brassicaceae View MSA
123839959 5264 Brassicales-Malvales View MSA
124345918 5266 SBM View MSA
124248769 5268 Malvidae View MSA
124074284 5270 Rosid View MSA
123751462 5271 Pentapetalae View MSA
122795351 5272 Eudicot View MSA
122048962 5273 Angiosperm View MSA
121311190 5274 Embryophyte View MSA
123348519 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain