Gene : AL7G14190 A. lyrata v2.1

Defline:  (1 of 7) K13789 - geranylgeranyl diphosphate synthase, type II (GGPS) Genomic Order:  404
Name:  ? AL7G14190 Secondary Identifier:  ? PAC:35937180

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5120 Arabidopsis lyrata pathologic  
Alyrata PWY-5122 Arabidopsis lyrata pathologic  
Alyrata PWY-5123 Arabidopsis lyrata pathologic  
Alyrata PWY-5910 Arabidopsis lyrata pathologic  
Alyrata PWY-7709 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL7G14190 0.5kb upstream 0.5kb upstream 2055   true scaffold_7: 1670981-1673035 Arabidopsis lyrata
AL7G14190 0.5kb upstream 0.5kb upstream 500   false scaffold_7: 1672536-1673035 Arabidopsis lyrata
AL7G14190 0.5kb downstream 0.5kb downstream 2055   true scaffold_7: 1670481-1672535 Arabidopsis lyrata
AL7G14190 0.5kb downstream 0.5kb downstream 500   false scaffold_7: 1670481-1670980 Arabidopsis lyrata
AL7G14190 1.0kb upstream 1.0kb upstream 2555   true scaffold_7: 1670981-1673535 Arabidopsis lyrata
AL7G14190 1.0kb upstream 1.0kb upstream 1000   false scaffold_7: 1672536-1673535 Arabidopsis lyrata
AL7G14190 1.0kb downstream 1.0kb downstream 2555   true scaffold_7: 1669981-1672535 Arabidopsis lyrata
AL7G14190 1.0kb downstream 1.0kb downstream 1000   false scaffold_7: 1669981-1670980 Arabidopsis lyrata
AL7G14190 2.0kb upstream 2.0kb upstream 3555   true scaffold_7: 1670981-1674535 Arabidopsis lyrata
AL7G14190 2.0kb upstream 2.0kb upstream 2000   false scaffold_7: 1672536-1674535 Arabidopsis lyrata
AL7G14190 2.0kb downstream 2.0kb downstream 3555   true scaffold_7: 1668981-1672535 Arabidopsis lyrata
AL7G14190 2.0kb downstream 2.0kb downstream 2000   false scaffold_7: 1668981-1670980 Arabidopsis lyrata
AL7G14190 5.0kb upstream 5.0kb upstream 6555   true scaffold_7: 1670981-1677535 Arabidopsis lyrata
AL7G14190 5.0kb upstream 5.0kb upstream 5000   false scaffold_7: 1672536-1677535 Arabidopsis lyrata
AL7G14190 5.0kb downstream 5.0kb downstream 6555   true scaffold_7: 1665981-1672535 Arabidopsis lyrata
AL7G14190 5.0kb downstream 5.0kb downstream 5000   false scaffold_7: 1665981-1670980 Arabidopsis lyrata
AL7G14190 10.0kb upstream 10.0kb upstream 11555   true scaffold_7: 1670981-1682535 Arabidopsis lyrata
AL7G14190 10.0kb upstream 10.0kb upstream 10000   false scaffold_7: 1672536-1682535 Arabidopsis lyrata
AL7G14190 10.0kb downstream 10.0kb downstream 11555   true scaffold_7: 1660981-1672535 Arabidopsis lyrata
AL7G14190 10.0kb downstream 10.0kb downstream 10000   false scaffold_7: 1660981-1670980 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367491 5261 Brassicaceae View MSA
123840424 5264 Brassicales-Malvales View MSA
124338716 5266 SBM View MSA
124237101 5268 Malvidae View MSA
124062615 5270 Rosid View MSA
123750127 5271 Pentapetalae View MSA
122794006 5272 Eudicot View MSA
122045672 5273 Angiosperm View MSA
121348382 5274 Embryophyte View MSA
123424390 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain