Gene : AL7G32970 A. lyrata v2.1

Defline:  (1 of 1) K12667 - oligosaccharyltransferase complex subunit delta (ribophorin II) (SWP1, RPN2) Genomic Order:  2190
Name:  ? AL7G32970 Secondary Identifier:  ? PAC:35936183

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL7G32970 0.5kb upstream 0.5kb upstream 5782   true scaffold_7: 9454594-9460375 Arabidopsis lyrata
AL7G32970 0.5kb upstream 0.5kb upstream 500   false scaffold_7: 9459876-9460375 Arabidopsis lyrata
AL7G32970 0.5kb downstream 0.5kb downstream 5782   true scaffold_7: 9454094-9459875 Arabidopsis lyrata
AL7G32970 0.5kb downstream 0.5kb downstream 500   false scaffold_7: 9454094-9454593 Arabidopsis lyrata
AL7G32970 1.0kb upstream 1.0kb upstream 6282   true scaffold_7: 9454594-9460875 Arabidopsis lyrata
AL7G32970 1.0kb upstream 1.0kb upstream 1000   false scaffold_7: 9459876-9460875 Arabidopsis lyrata
AL7G32970 1.0kb downstream 1.0kb downstream 6282   true scaffold_7: 9453594-9459875 Arabidopsis lyrata
AL7G32970 1.0kb downstream 1.0kb downstream 1000   false scaffold_7: 9453594-9454593 Arabidopsis lyrata
AL7G32970 2.0kb upstream 2.0kb upstream 7282   true scaffold_7: 9454594-9461875 Arabidopsis lyrata
AL7G32970 2.0kb upstream 2.0kb upstream 2000   false scaffold_7: 9459876-9461875 Arabidopsis lyrata
AL7G32970 2.0kb downstream 2.0kb downstream 7282   true scaffold_7: 9452594-9459875 Arabidopsis lyrata
AL7G32970 2.0kb downstream 2.0kb downstream 2000   false scaffold_7: 9452594-9454593 Arabidopsis lyrata
AL7G32970 5.0kb upstream 5.0kb upstream 10282   true scaffold_7: 9454594-9464875 Arabidopsis lyrata
AL7G32970 5.0kb upstream 5.0kb upstream 5000   false scaffold_7: 9459876-9464875 Arabidopsis lyrata
AL7G32970 5.0kb downstream 5.0kb downstream 10282   true scaffold_7: 9449594-9459875 Arabidopsis lyrata
AL7G32970 5.0kb downstream 5.0kb downstream 5000   false scaffold_7: 9449594-9454593 Arabidopsis lyrata
AL7G32970 10.0kb upstream 10.0kb upstream 15282   true scaffold_7: 9454594-9469875 Arabidopsis lyrata
AL7G32970 10.0kb upstream 10.0kb upstream 10000   false scaffold_7: 9459876-9469875 Arabidopsis lyrata
AL7G32970 10.0kb downstream 10.0kb downstream 15282   true scaffold_7: 9444594-9459875 Arabidopsis lyrata
AL7G32970 10.0kb downstream 10.0kb downstream 10000   false scaffold_7: 9444594-9454593 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041028 5273 Angiosperm View MSA
122369226 5261 Brassicaceae View MSA
123830435 5264 Brassicales-Malvales View MSA
124341410 5266 SBM View MSA
124253073 5268 Malvidae View MSA
124066748 5270 Rosid View MSA
123737285 5271 Pentapetalae View MSA
122787550 5272 Eudicot View MSA
121344151 5274 Embryophyte View MSA
123379986 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain