Gene : AL7G32830 A. lyrata v2.1

Defline:  (1 of 2) PTHR33399:SF3 - OXYGEN-EVOLVING ENHANCER PROTEIN 3-1, CHLOROPLASTIC-RELATED Genomic Order:  2176
Name:  ? AL7G32830 Secondary Identifier:  ? PAC:35938237

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PHOTOALL-PWY Arabidopsis lyrata pathologic  
Alyrata PWY-101 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL7G32830 0.5kb upstream 0.5kb upstream 2196   true scaffold_7: 9400364-9402559 Arabidopsis lyrata
AL7G32830 0.5kb upstream 0.5kb upstream 500   false scaffold_7: 9402060-9402559 Arabidopsis lyrata
AL7G32830 0.5kb downstream 0.5kb downstream 2196   true scaffold_7: 9399864-9402059 Arabidopsis lyrata
AL7G32830 0.5kb downstream 0.5kb downstream 500   false scaffold_7: 9399864-9400363 Arabidopsis lyrata
AL7G32830 1.0kb upstream 1.0kb upstream 2696   true scaffold_7: 9400364-9403059 Arabidopsis lyrata
AL7G32830 1.0kb upstream 1.0kb upstream 1000   false scaffold_7: 9402060-9403059 Arabidopsis lyrata
AL7G32830 1.0kb downstream 1.0kb downstream 2696   true scaffold_7: 9399364-9402059 Arabidopsis lyrata
AL7G32830 1.0kb downstream 1.0kb downstream 1000   false scaffold_7: 9399364-9400363 Arabidopsis lyrata
AL7G32830 2.0kb upstream 2.0kb upstream 3696   true scaffold_7: 9400364-9404059 Arabidopsis lyrata
AL7G32830 2.0kb upstream 2.0kb upstream 2000   false scaffold_7: 9402060-9404059 Arabidopsis lyrata
AL7G32830 2.0kb downstream 2.0kb downstream 3696   true scaffold_7: 9398364-9402059 Arabidopsis lyrata
AL7G32830 2.0kb downstream 2.0kb downstream 2000   false scaffold_7: 9398364-9400363 Arabidopsis lyrata
AL7G32830 5.0kb upstream 5.0kb upstream 6696   true scaffold_7: 9400364-9407059 Arabidopsis lyrata
AL7G32830 5.0kb upstream 5.0kb upstream 5000   false scaffold_7: 9402060-9407059 Arabidopsis lyrata
AL7G32830 5.0kb downstream 5.0kb downstream 6696   true scaffold_7: 9395364-9402059 Arabidopsis lyrata
AL7G32830 5.0kb downstream 5.0kb downstream 5000   false scaffold_7: 9395364-9400363 Arabidopsis lyrata
AL7G32830 10.0kb upstream 10.0kb upstream 11696   true scaffold_7: 9400364-9412059 Arabidopsis lyrata
AL7G32830 10.0kb upstream 10.0kb upstream 10000   false scaffold_7: 9402060-9412059 Arabidopsis lyrata
AL7G32830 10.0kb downstream 10.0kb downstream 11696   true scaffold_7: 9390364-9402059 Arabidopsis lyrata
AL7G32830 10.0kb downstream 10.0kb downstream 10000   false scaffold_7: 9390364-9400363 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364990 5261 Brassicaceae View MSA
123838600 5264 Brassicales-Malvales View MSA
124342527 5266 SBM View MSA
124238022 5268 Malvidae View MSA
124068035 5270 Rosid View MSA
123737093 5271 Pentapetalae View MSA
122790173 5272 Eudicot View MSA
122043772 5273 Angiosperm View MSA
121344186 5274 Embryophyte View MSA
123427004 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain