Gene : AL7G27890 A. lyrata v2.1

Defline:  (1 of 5) PTHR31080:SF2 - F23N19.14-RELATED Genomic Order:  1714
Name:  ? AL7G27890 Secondary Identifier:  ? PAC:35936191

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-1081 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL7G27890 0.5kb upstream 0.5kb upstream 1268   true scaffold_7: 7239106-7240373 Arabidopsis lyrata
AL7G27890 0.5kb upstream 0.5kb upstream 500   false scaffold_7: 7239874-7240373 Arabidopsis lyrata
AL7G27890 0.5kb downstream 0.5kb downstream 1268   true scaffold_7: 7238606-7239873 Arabidopsis lyrata
AL7G27890 0.5kb downstream 0.5kb downstream 500   false scaffold_7: 7238606-7239105 Arabidopsis lyrata
AL7G27890 1.0kb upstream 1.0kb upstream 1768   true scaffold_7: 7239106-7240873 Arabidopsis lyrata
AL7G27890 1.0kb upstream 1.0kb upstream 1000   false scaffold_7: 7239874-7240873 Arabidopsis lyrata
AL7G27890 1.0kb downstream 1.0kb downstream 1768   true scaffold_7: 7238106-7239873 Arabidopsis lyrata
AL7G27890 1.0kb downstream 1.0kb downstream 1000   false scaffold_7: 7238106-7239105 Arabidopsis lyrata
AL7G27890 2.0kb upstream 2.0kb upstream 2768   true scaffold_7: 7239106-7241873 Arabidopsis lyrata
AL7G27890 2.0kb upstream 2.0kb upstream 2000   false scaffold_7: 7239874-7241873 Arabidopsis lyrata
AL7G27890 2.0kb downstream 2.0kb downstream 2768   true scaffold_7: 7237106-7239873 Arabidopsis lyrata
AL7G27890 2.0kb downstream 2.0kb downstream 2000   false scaffold_7: 7237106-7239105 Arabidopsis lyrata
AL7G27890 5.0kb upstream 5.0kb upstream 5768   true scaffold_7: 7239106-7244873 Arabidopsis lyrata
AL7G27890 5.0kb upstream 5.0kb upstream 5000   false scaffold_7: 7239874-7244873 Arabidopsis lyrata
AL7G27890 5.0kb downstream 5.0kb downstream 5768   true scaffold_7: 7234106-7239873 Arabidopsis lyrata
AL7G27890 5.0kb downstream 5.0kb downstream 5000   false scaffold_7: 7234106-7239105 Arabidopsis lyrata
AL7G27890 10.0kb upstream 10.0kb upstream 10768   true scaffold_7: 7239106-7249873 Arabidopsis lyrata
AL7G27890 10.0kb upstream 10.0kb upstream 10000   false scaffold_7: 7239874-7249873 Arabidopsis lyrata
AL7G27890 10.0kb downstream 10.0kb downstream 10768   true scaffold_7: 7229106-7239873 Arabidopsis lyrata
AL7G27890 10.0kb downstream 10.0kb downstream 10000   false scaffold_7: 7229106-7239105 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362171 5261 Brassicaceae View MSA
123837730 5264 Brassicales-Malvales View MSA
124338445 5266 SBM View MSA
124251328 5268 Malvidae View MSA
124069066 5270 Rosid View MSA
123751304 5271 Pentapetalae View MSA
122797599 5272 Eudicot View MSA
122046899 5273 Angiosperm View MSA
121310670 5274 Embryophyte View MSA
123348096 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain