Gene : AL7G28050 A. lyrata v2.1

Defline:  (1 of 2) PTHR11404:SF24 - SUPEROXIDE DISMUTASE [FE] 2, CHLOROPLASTIC Genomic Order:  1730
Name:  ? AL7G28050 Secondary Identifier:  ? PAC:35937438

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata DETOX1-PWY Arabidopsis lyrata pathologic  
Alyrata DETOX1-PWY-1 Arabidopsis lyrata pathologic  
Alyrata PWY-6854 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL7G28050 0.5kb upstream 0.5kb upstream 2710   true scaffold_7: 7290055-7292764 Arabidopsis lyrata
AL7G28050 0.5kb upstream 0.5kb upstream 500   false scaffold_7: 7290055-7290554 Arabidopsis lyrata
AL7G28050 0.5kb downstream 0.5kb downstream 2710   true scaffold_7: 7290555-7293264 Arabidopsis lyrata
AL7G28050 0.5kb downstream 0.5kb downstream 500   false scaffold_7: 7292765-7293264 Arabidopsis lyrata
AL7G28050 1.0kb upstream 1.0kb upstream 3210   true scaffold_7: 7289555-7292764 Arabidopsis lyrata
AL7G28050 1.0kb upstream 1.0kb upstream 1000   false scaffold_7: 7289555-7290554 Arabidopsis lyrata
AL7G28050 1.0kb downstream 1.0kb downstream 3210   true scaffold_7: 7290555-7293764 Arabidopsis lyrata
AL7G28050 1.0kb downstream 1.0kb downstream 1000   false scaffold_7: 7292765-7293764 Arabidopsis lyrata
AL7G28050 2.0kb upstream 2.0kb upstream 4210   true scaffold_7: 7288555-7292764 Arabidopsis lyrata
AL7G28050 2.0kb upstream 2.0kb upstream 2000   false scaffold_7: 7288555-7290554 Arabidopsis lyrata
AL7G28050 2.0kb downstream 2.0kb downstream 4210   true scaffold_7: 7290555-7294764 Arabidopsis lyrata
AL7G28050 2.0kb downstream 2.0kb downstream 2000   false scaffold_7: 7292765-7294764 Arabidopsis lyrata
AL7G28050 5.0kb upstream 5.0kb upstream 7210   true scaffold_7: 7285555-7292764 Arabidopsis lyrata
AL7G28050 5.0kb upstream 5.0kb upstream 5000   false scaffold_7: 7285555-7290554 Arabidopsis lyrata
AL7G28050 5.0kb downstream 5.0kb downstream 7210   true scaffold_7: 7290555-7297764 Arabidopsis lyrata
AL7G28050 5.0kb downstream 5.0kb downstream 5000   false scaffold_7: 7292765-7297764 Arabidopsis lyrata
AL7G28050 10.0kb upstream 10.0kb upstream 12210   true scaffold_7: 7280555-7292764 Arabidopsis lyrata
AL7G28050 10.0kb upstream 10.0kb upstream 10000   false scaffold_7: 7280555-7290554 Arabidopsis lyrata
AL7G28050 10.0kb downstream 10.0kb downstream 12210   true scaffold_7: 7290555-7302764 Arabidopsis lyrata
AL7G28050 10.0kb downstream 10.0kb downstream 10000   false scaffold_7: 7292765-7302764 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370198 5261 Brassicaceae View MSA
123799915 5264 Brassicales-Malvales View MSA
124297385 5266 SBM View MSA
124149294 5268 Malvidae View MSA
124072391 5270 Rosid View MSA
123741409 5271 Pentapetalae View MSA
122787652 5272 Eudicot View MSA
122047747 5273 Angiosperm View MSA
121351401 5274 Embryophyte View MSA
123425969 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain