Gene : AL7G27430 A. lyrata v2.1

Defline:  (1 of 1) PTHR21266:SF25 - PROTOCHLOROPHYLLIDE-DEPENDENT TRANSLOCON COMPONENT 52, CHLOROPLASTIC Genomic Order:  1670
Name:  ? AL7G27430 Secondary Identifier:  ? PAC:35938847

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5098 Arabidopsis lyrata pathologic  
Alyrata PWY-6927 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL7G27430 0.5kb upstream 0.5kb upstream 2928   true scaffold_7: 7042171-7045098 Arabidopsis lyrata
AL7G27430 0.5kb upstream 0.5kb upstream 500   false scaffold_7: 7042171-7042670 Arabidopsis lyrata
AL7G27430 0.5kb downstream 0.5kb downstream 2928   true scaffold_7: 7042671-7045598 Arabidopsis lyrata
AL7G27430 0.5kb downstream 0.5kb downstream 500   false scaffold_7: 7045099-7045598 Arabidopsis lyrata
AL7G27430 1.0kb upstream 1.0kb upstream 3428   true scaffold_7: 7041671-7045098 Arabidopsis lyrata
AL7G27430 1.0kb upstream 1.0kb upstream 1000   false scaffold_7: 7041671-7042670 Arabidopsis lyrata
AL7G27430 1.0kb downstream 1.0kb downstream 3428   true scaffold_7: 7042671-7046098 Arabidopsis lyrata
AL7G27430 1.0kb downstream 1.0kb downstream 1000   false scaffold_7: 7045099-7046098 Arabidopsis lyrata
AL7G27430 2.0kb upstream 2.0kb upstream 4428   true scaffold_7: 7040671-7045098 Arabidopsis lyrata
AL7G27430 2.0kb upstream 2.0kb upstream 2000   false scaffold_7: 7040671-7042670 Arabidopsis lyrata
AL7G27430 2.0kb downstream 2.0kb downstream 4428   true scaffold_7: 7042671-7047098 Arabidopsis lyrata
AL7G27430 2.0kb downstream 2.0kb downstream 2000   false scaffold_7: 7045099-7047098 Arabidopsis lyrata
AL7G27430 5.0kb upstream 5.0kb upstream 7428   true scaffold_7: 7037671-7045098 Arabidopsis lyrata
AL7G27430 5.0kb upstream 5.0kb upstream 5000   false scaffold_7: 7037671-7042670 Arabidopsis lyrata
AL7G27430 5.0kb downstream 5.0kb downstream 7428   true scaffold_7: 7042671-7050098 Arabidopsis lyrata
AL7G27430 5.0kb downstream 5.0kb downstream 5000   false scaffold_7: 7045099-7050098 Arabidopsis lyrata
AL7G27430 10.0kb upstream 10.0kb upstream 12428   true scaffold_7: 7032671-7045098 Arabidopsis lyrata
AL7G27430 10.0kb upstream 10.0kb upstream 10000   false scaffold_7: 7032671-7042670 Arabidopsis lyrata
AL7G27430 10.0kb downstream 10.0kb downstream 12428   true scaffold_7: 7042671-7055098 Arabidopsis lyrata
AL7G27430 10.0kb downstream 10.0kb downstream 10000   false scaffold_7: 7045099-7055098 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370768 5261 Brassicaceae View MSA
123828575 5264 Brassicales-Malvales View MSA
124336609 5266 SBM View MSA
124240236 5268 Malvidae View MSA
124064980 5270 Rosid View MSA
123746425 5271 Pentapetalae View MSA
122797838 5272 Eudicot View MSA
122045189 5273 Angiosperm View MSA
123429167 5275 Viridiplantae View MSA
121347962 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain