Gene : AL7G25940 A. lyrata v2.1

Defline:  (1 of 2) 2.3.1.61 - Dihydrolipoyllysine-residue succinyltransferase / Succinyl-CoA:dihydrolipoate S-succinyltransferase Genomic Order:  1528
Name:  ? AL7G25940 Secondary Identifier:  ? PAC:35938008

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5084 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL7G25940 0.5kb upstream 0.5kb upstream 3787   true scaffold_7: 6462630-6466416 Arabidopsis lyrata
AL7G25940 0.5kb upstream 0.5kb upstream 500   false scaffold_7: 6462630-6463129 Arabidopsis lyrata
AL7G25940 0.5kb downstream 0.5kb downstream 3787   true scaffold_7: 6463130-6466916 Arabidopsis lyrata
AL7G25940 0.5kb downstream 0.5kb downstream 500   false scaffold_7: 6466417-6466916 Arabidopsis lyrata
AL7G25940 1.0kb upstream 1.0kb upstream 4287   true scaffold_7: 6462130-6466416 Arabidopsis lyrata
AL7G25940 1.0kb upstream 1.0kb upstream 1000   false scaffold_7: 6462130-6463129 Arabidopsis lyrata
AL7G25940 1.0kb downstream 1.0kb downstream 4287   true scaffold_7: 6463130-6467416 Arabidopsis lyrata
AL7G25940 1.0kb downstream 1.0kb downstream 1000   false scaffold_7: 6466417-6467416 Arabidopsis lyrata
AL7G25940 2.0kb upstream 2.0kb upstream 5287   true scaffold_7: 6461130-6466416 Arabidopsis lyrata
AL7G25940 2.0kb upstream 2.0kb upstream 2000   false scaffold_7: 6461130-6463129 Arabidopsis lyrata
AL7G25940 2.0kb downstream 2.0kb downstream 5287   true scaffold_7: 6463130-6468416 Arabidopsis lyrata
AL7G25940 2.0kb downstream 2.0kb downstream 2000   false scaffold_7: 6466417-6468416 Arabidopsis lyrata
AL7G25940 5.0kb upstream 5.0kb upstream 8287   true scaffold_7: 6458130-6466416 Arabidopsis lyrata
AL7G25940 5.0kb upstream 5.0kb upstream 5000   false scaffold_7: 6458130-6463129 Arabidopsis lyrata
AL7G25940 5.0kb downstream 5.0kb downstream 8287   true scaffold_7: 6463130-6471416 Arabidopsis lyrata
AL7G25940 5.0kb downstream 5.0kb downstream 5000   false scaffold_7: 6466417-6471416 Arabidopsis lyrata
AL7G25940 10.0kb upstream 10.0kb upstream 13287   true scaffold_7: 6453130-6466416 Arabidopsis lyrata
AL7G25940 10.0kb upstream 10.0kb upstream 10000   false scaffold_7: 6453130-6463129 Arabidopsis lyrata
AL7G25940 10.0kb downstream 10.0kb downstream 13287   true scaffold_7: 6463130-6476416 Arabidopsis lyrata
AL7G25940 10.0kb downstream 10.0kb downstream 10000   false scaffold_7: 6466417-6476416 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343423 5261 Brassicaceae View MSA
123838684 5264 Brassicales-Malvales View MSA
124343102 5266 SBM View MSA
124250651 5268 Malvidae View MSA
124065559 5270 Rosid View MSA
123743660 5271 Pentapetalae View MSA
122793547 5272 Eudicot View MSA
122045600 5273 Angiosperm View MSA
121347048 5274 Embryophyte View MSA
123423906 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain