Gene : AL7G25860 A. lyrata v2.1

Defline:  (1 of 6) 4.2.1.3 - Aconitate hydratase / Citrate(isocitrate) hydro-lyase Genomic Order:  1521
Name:  ? AL7G25860 Secondary Identifier:  ? PAC:35937526

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Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata GLYOXYLATE-BYPASS Arabidopsis lyrata pathologic  
Alyrata PWY-5464 Arabidopsis lyrata pathologic  
Alyrata PWY-561 Arabidopsis lyrata pathologic  
Alyrata PWY-5690 Arabidopsis lyrata pathologic  
Alyrata PWY-6549 Arabidopsis lyrata pathologic  

Genomics

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Gene Structure Displayer

Expression

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL7G25860 0.5kb upstream 0.5kb upstream 6434   true scaffold_7: 6437972-6444405 Arabidopsis lyrata
AL7G25860 0.5kb upstream 0.5kb upstream 500   false scaffold_7: 6443906-6444405 Arabidopsis lyrata
AL7G25860 0.5kb downstream 0.5kb downstream 6434   true scaffold_7: 6437472-6443905 Arabidopsis lyrata
AL7G25860 0.5kb downstream 0.5kb downstream 500   false scaffold_7: 6437472-6437971 Arabidopsis lyrata
AL7G25860 1.0kb upstream 1.0kb upstream 6934   true scaffold_7: 6437972-6444905 Arabidopsis lyrata
AL7G25860 1.0kb upstream 1.0kb upstream 1000   false scaffold_7: 6443906-6444905 Arabidopsis lyrata
AL7G25860 1.0kb downstream 1.0kb downstream 6934   true scaffold_7: 6436972-6443905 Arabidopsis lyrata
AL7G25860 1.0kb downstream 1.0kb downstream 1000   false scaffold_7: 6436972-6437971 Arabidopsis lyrata
AL7G25860 2.0kb upstream 2.0kb upstream 7934   true scaffold_7: 6437972-6445905 Arabidopsis lyrata
AL7G25860 2.0kb upstream 2.0kb upstream 2000   false scaffold_7: 6443906-6445905 Arabidopsis lyrata
AL7G25860 2.0kb downstream 2.0kb downstream 7934   true scaffold_7: 6435972-6443905 Arabidopsis lyrata
AL7G25860 2.0kb downstream 2.0kb downstream 2000   false scaffold_7: 6435972-6437971 Arabidopsis lyrata
AL7G25860 5.0kb upstream 5.0kb upstream 10934   true scaffold_7: 6437972-6448905 Arabidopsis lyrata
AL7G25860 5.0kb upstream 5.0kb upstream 5000   false scaffold_7: 6443906-6448905 Arabidopsis lyrata
AL7G25860 5.0kb downstream 5.0kb downstream 10934   true scaffold_7: 6432972-6443905 Arabidopsis lyrata
AL7G25860 5.0kb downstream 5.0kb downstream 5000   false scaffold_7: 6432972-6437971 Arabidopsis lyrata
AL7G25860 10.0kb upstream 10.0kb upstream 15934   true scaffold_7: 6437972-6453905 Arabidopsis lyrata
AL7G25860 10.0kb upstream 10.0kb upstream 10000   false scaffold_7: 6443906-6453905 Arabidopsis lyrata
AL7G25860 10.0kb downstream 10.0kb downstream 15934   true scaffold_7: 6427972-6443905 Arabidopsis lyrata
AL7G25860 10.0kb downstream 10.0kb downstream 10000   false scaffold_7: 6427972-6437971 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374065 5261 Brassicaceae View MSA
123840370 5264 Brassicales-Malvales View MSA
124350117 5266 SBM View MSA
124253803 5268 Malvidae View MSA
124069488 5270 Rosid View MSA
123752886 5271 Pentapetalae View MSA
122795491 5272 Eudicot View MSA
122043810 5273 Angiosperm View MSA
121344247 5274 Embryophyte View MSA
123428745 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain