Gene : AL7G43860 A. lyrata v2.1

Defline:  (1 of 1) PTHR14363:SF16 - HEPARANASE-LIKE PROTEIN 3 Genomic Order:  3172
Name:  ? AL7G43860 Secondary Identifier:  ? PAC:35938591

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-7213 Arabidopsis lyrata pathologic  
Alyrata PWY-7214 Arabidopsis lyrata pathologic  
Alyrata PWY-7445 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL7G43860 0.5kb upstream 0.5kb upstream 3303   true scaffold_7: 17927860-17931162 Arabidopsis lyrata
AL7G43860 0.5kb upstream 0.5kb upstream 500   false scaffold_7: 17930663-17931162 Arabidopsis lyrata
AL7G43860 0.5kb downstream 0.5kb downstream 3303   true scaffold_7: 17927360-17930662 Arabidopsis lyrata
AL7G43860 0.5kb downstream 0.5kb downstream 500   false scaffold_7: 17927360-17927859 Arabidopsis lyrata
AL7G43860 1.0kb upstream 1.0kb upstream 3803   true scaffold_7: 17927860-17931662 Arabidopsis lyrata
AL7G43860 1.0kb upstream 1.0kb upstream 1000   false scaffold_7: 17930663-17931662 Arabidopsis lyrata
AL7G43860 1.0kb downstream 1.0kb downstream 3803   true scaffold_7: 17926860-17930662 Arabidopsis lyrata
AL7G43860 1.0kb downstream 1.0kb downstream 1000   false scaffold_7: 17926860-17927859 Arabidopsis lyrata
AL7G43860 2.0kb upstream 2.0kb upstream 4803   true scaffold_7: 17927860-17932662 Arabidopsis lyrata
AL7G43860 2.0kb upstream 2.0kb upstream 2000   false scaffold_7: 17930663-17932662 Arabidopsis lyrata
AL7G43860 2.0kb downstream 2.0kb downstream 4803   true scaffold_7: 17925860-17930662 Arabidopsis lyrata
AL7G43860 2.0kb downstream 2.0kb downstream 2000   false scaffold_7: 17925860-17927859 Arabidopsis lyrata
AL7G43860 5.0kb upstream 5.0kb upstream 7803   true scaffold_7: 17927860-17935662 Arabidopsis lyrata
AL7G43860 5.0kb upstream 5.0kb upstream 5000   false scaffold_7: 17930663-17935662 Arabidopsis lyrata
AL7G43860 5.0kb downstream 5.0kb downstream 7803   true scaffold_7: 17922860-17930662 Arabidopsis lyrata
AL7G43860 5.0kb downstream 5.0kb downstream 5000   false scaffold_7: 17922860-17927859 Arabidopsis lyrata
AL7G43860 10.0kb upstream 10.0kb upstream 12803   true scaffold_7: 17927860-17940662 Arabidopsis lyrata
AL7G43860 10.0kb upstream 10.0kb upstream 10000   false scaffold_7: 17930663-17940662 Arabidopsis lyrata
AL7G43860 10.0kb downstream 10.0kb downstream 12803   true scaffold_7: 17917860-17930662 Arabidopsis lyrata
AL7G43860 10.0kb downstream 10.0kb downstream 10000   false scaffold_7: 17917860-17927859 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374580 5261 Brassicaceae View MSA
123834676 5264 Brassicales-Malvales View MSA
124339213 5266 SBM View MSA
124244974 5268 Malvidae View MSA
124063624 5270 Rosid View MSA
123745490 5271 Pentapetalae View MSA
122791250 5272 Eudicot View MSA
122042729 5273 Angiosperm View MSA
121348264 5274 Embryophyte View MSA
123380798 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain