Gene : AL7G42350 A. lyrata v2.1

Defline:  (1 of 2) 6.2.1.20 - Long-chain-fatty-acid--[acyl-carrier-protein] ligase / Acyl-[acyl-carrier-protein] synthetase Genomic Order:  3056
Name:  ? AL7G42350 Secondary Identifier:  ? PAC:35937398

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-6622 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL7G42350 0.5kb upstream 0.5kb upstream 7038   true scaffold_7: 14385807-14392844 Arabidopsis lyrata
AL7G42350 0.5kb upstream 0.5kb upstream 500   false scaffold_7: 14385807-14386306 Arabidopsis lyrata
AL7G42350 0.5kb downstream 0.5kb downstream 7038   true scaffold_7: 14386307-14393344 Arabidopsis lyrata
AL7G42350 0.5kb downstream 0.5kb downstream 500   false scaffold_7: 14392845-14393344 Arabidopsis lyrata
AL7G42350 1.0kb upstream 1.0kb upstream 7538   true scaffold_7: 14385307-14392844 Arabidopsis lyrata
AL7G42350 1.0kb upstream 1.0kb upstream 1000   false scaffold_7: 14385307-14386306 Arabidopsis lyrata
AL7G42350 1.0kb downstream 1.0kb downstream 7538   true scaffold_7: 14386307-14393844 Arabidopsis lyrata
AL7G42350 1.0kb downstream 1.0kb downstream 1000   false scaffold_7: 14392845-14393844 Arabidopsis lyrata
AL7G42350 2.0kb upstream 2.0kb upstream 8538   true scaffold_7: 14384307-14392844 Arabidopsis lyrata
AL7G42350 2.0kb upstream 2.0kb upstream 2000   false scaffold_7: 14384307-14386306 Arabidopsis lyrata
AL7G42350 2.0kb downstream 2.0kb downstream 8538   true scaffold_7: 14386307-14394844 Arabidopsis lyrata
AL7G42350 2.0kb downstream 2.0kb downstream 2000   false scaffold_7: 14392845-14394844 Arabidopsis lyrata
AL7G42350 5.0kb upstream 5.0kb upstream 11538   true scaffold_7: 14381307-14392844 Arabidopsis lyrata
AL7G42350 5.0kb upstream 5.0kb upstream 5000   false scaffold_7: 14381307-14386306 Arabidopsis lyrata
AL7G42350 5.0kb downstream 5.0kb downstream 11538   true scaffold_7: 14386307-14397844 Arabidopsis lyrata
AL7G42350 5.0kb downstream 5.0kb downstream 5000   false scaffold_7: 14392845-14397844 Arabidopsis lyrata
AL7G42350 10.0kb upstream 10.0kb upstream 16538   true scaffold_7: 14376307-14392844 Arabidopsis lyrata
AL7G42350 10.0kb upstream 10.0kb upstream 10000   false scaffold_7: 14376307-14386306 Arabidopsis lyrata
AL7G42350 10.0kb downstream 10.0kb downstream 16538   true scaffold_7: 14386307-14402844 Arabidopsis lyrata
AL7G42350 10.0kb downstream 10.0kb downstream 10000   false scaffold_7: 14392845-14402844 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372411 5261 Brassicaceae View MSA
123800358 5264 Brassicales-Malvales View MSA
124297775 5266 SBM View MSA
124149578 5268 Malvidae View MSA
124063017 5270 Rosid View MSA
123740730 5271 Pentapetalae View MSA
122788844 5272 Eudicot View MSA
122041588 5273 Angiosperm View MSA
121344484 5274 Embryophyte View MSA
123427454 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain