Gene : AL7G39770 A. lyrata v2.1

Defline:  (1 of 7) PTHR10168:SF115 - MONOTHIOL GLUTAREDOXIN-S2-RELATED Genomic Order:  2824
Name:  ? AL7G39770 Secondary Identifier:  ? PAC:35938354

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata THIOREDOX-PWY Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL7G39770 0.5kb upstream 0.5kb upstream 1177   true scaffold_7: 12753191-12754367 Arabidopsis lyrata
AL7G39770 0.5kb upstream 0.5kb upstream 500   false scaffold_7: 12753868-12754367 Arabidopsis lyrata
AL7G39770 0.5kb downstream 0.5kb downstream 1177   true scaffold_7: 12752691-12753867 Arabidopsis lyrata
AL7G39770 0.5kb downstream 0.5kb downstream 500   false scaffold_7: 12752691-12753190 Arabidopsis lyrata
AL7G39770 1.0kb upstream 1.0kb upstream 1677   true scaffold_7: 12753191-12754867 Arabidopsis lyrata
AL7G39770 1.0kb upstream 1.0kb upstream 1000   false scaffold_7: 12753868-12754867 Arabidopsis lyrata
AL7G39770 1.0kb downstream 1.0kb downstream 1677   true scaffold_7: 12752191-12753867 Arabidopsis lyrata
AL7G39770 1.0kb downstream 1.0kb downstream 1000   false scaffold_7: 12752191-12753190 Arabidopsis lyrata
AL7G39770 2.0kb upstream 2.0kb upstream 2677   true scaffold_7: 12753191-12755867 Arabidopsis lyrata
AL7G39770 2.0kb upstream 2.0kb upstream 2000   false scaffold_7: 12753868-12755867 Arabidopsis lyrata
AL7G39770 2.0kb downstream 2.0kb downstream 2677   true scaffold_7: 12751191-12753867 Arabidopsis lyrata
AL7G39770 2.0kb downstream 2.0kb downstream 2000   false scaffold_7: 12751191-12753190 Arabidopsis lyrata
AL7G39770 5.0kb upstream 5.0kb upstream 5677   true scaffold_7: 12753191-12758867 Arabidopsis lyrata
AL7G39770 5.0kb upstream 5.0kb upstream 5000   false scaffold_7: 12753868-12758867 Arabidopsis lyrata
AL7G39770 5.0kb downstream 5.0kb downstream 5677   true scaffold_7: 12748191-12753867 Arabidopsis lyrata
AL7G39770 5.0kb downstream 5.0kb downstream 5000   false scaffold_7: 12748191-12753190 Arabidopsis lyrata
AL7G39770 10.0kb upstream 10.0kb upstream 10677   true scaffold_7: 12753191-12763867 Arabidopsis lyrata
AL7G39770 10.0kb upstream 10.0kb upstream 10000   false scaffold_7: 12753868-12763867 Arabidopsis lyrata
AL7G39770 10.0kb downstream 10.0kb downstream 10677   true scaffold_7: 12743191-12753867 Arabidopsis lyrata
AL7G39770 10.0kb downstream 10.0kb downstream 10000   false scaffold_7: 12743191-12753190 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122332063 5261 Brassicaceae View MSA
123773179 5264 Brassicales-Malvales View MSA
124271676 5266 SBM View MSA
124127641 5268 Malvidae View MSA
123856470 5270 Rosid View MSA
123750086 5271 Pentapetalae View MSA
122796200 5272 Eudicot View MSA
122047042 5273 Angiosperm View MSA
121349593 5274 Embryophyte View MSA
123381368 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain