Gene : AL7G39960 A. lyrata v2.1

Defline:  (1 of 5) 2.4.1.121 - Indole-3-acetate beta-glucosyltransferase / IAA-Glu synthetase Genomic Order:  2840
Name:  ? AL7G39960 Secondary Identifier:  ? PAC:35937990

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-1741 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL7G39960 0.5kb upstream 0.5kb upstream 2048   true scaffold_7: 12847483-12849530 Arabidopsis lyrata
AL7G39960 0.5kb upstream 0.5kb upstream 500   false scaffold_7: 12847483-12847982 Arabidopsis lyrata
AL7G39960 0.5kb downstream 0.5kb downstream 2048   true scaffold_7: 12847983-12850030 Arabidopsis lyrata
AL7G39960 0.5kb downstream 0.5kb downstream 500   false scaffold_7: 12849531-12850030 Arabidopsis lyrata
AL7G39960 1.0kb upstream 1.0kb upstream 2548   true scaffold_7: 12846983-12849530 Arabidopsis lyrata
AL7G39960 1.0kb upstream 1.0kb upstream 1000   false scaffold_7: 12846983-12847982 Arabidopsis lyrata
AL7G39960 1.0kb downstream 1.0kb downstream 2548   true scaffold_7: 12847983-12850530 Arabidopsis lyrata
AL7G39960 1.0kb downstream 1.0kb downstream 1000   false scaffold_7: 12849531-12850530 Arabidopsis lyrata
AL7G39960 2.0kb upstream 2.0kb upstream 3548   true scaffold_7: 12845983-12849530 Arabidopsis lyrata
AL7G39960 2.0kb upstream 2.0kb upstream 2000   false scaffold_7: 12845983-12847982 Arabidopsis lyrata
AL7G39960 2.0kb downstream 2.0kb downstream 3548   true scaffold_7: 12847983-12851530 Arabidopsis lyrata
AL7G39960 2.0kb downstream 2.0kb downstream 2000   false scaffold_7: 12849531-12851530 Arabidopsis lyrata
AL7G39960 5.0kb upstream 5.0kb upstream 6548   true scaffold_7: 12842983-12849530 Arabidopsis lyrata
AL7G39960 5.0kb upstream 5.0kb upstream 5000   false scaffold_7: 12842983-12847982 Arabidopsis lyrata
AL7G39960 5.0kb downstream 5.0kb downstream 6548   true scaffold_7: 12847983-12854530 Arabidopsis lyrata
AL7G39960 5.0kb downstream 5.0kb downstream 5000   false scaffold_7: 12849531-12854530 Arabidopsis lyrata
AL7G39960 10.0kb upstream 10.0kb upstream 11548   true scaffold_7: 12837983-12849530 Arabidopsis lyrata
AL7G39960 10.0kb upstream 10.0kb upstream 10000   false scaffold_7: 12837983-12847982 Arabidopsis lyrata
AL7G39960 10.0kb downstream 10.0kb downstream 11548   true scaffold_7: 12847983-12859530 Arabidopsis lyrata
AL7G39960 10.0kb downstream 10.0kb downstream 10000   false scaffold_7: 12849531-12859530 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041128 5273 Angiosperm View MSA
122373226 5261 Brassicaceae View MSA
123800516 5264 Brassicales-Malvales View MSA
124349633 5266 SBM View MSA
124250942 5268 Malvidae View MSA
124061507 5270 Rosid View MSA
123741029 5271 Pentapetalae View MSA
122792347 5272 Eudicot View MSA
121309799 5274 Embryophyte View MSA
123428681 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain