Gene : AL7G40970 A. lyrata v2.1

Defline:  (1 of 2) PTHR10314//PTHR10314:SF101 - SER/THR DEHYDRATASE, TRP SYNTHASE // SUBFAMILY NOT NAMED Genomic Order:  2932
Name:  ? AL7G40970 Secondary Identifier:  ? PAC:35939118

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata CYSTSYN-PWY Arabidopsis lyrata pathologic  
Alyrata PWY-6936 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL7G40970 0.5kb upstream 0.5kb upstream 3035   true scaffold_7: 13542996-13546030 Arabidopsis lyrata
AL7G40970 0.5kb upstream 0.5kb upstream 500   false scaffold_7: 13542996-13543495 Arabidopsis lyrata
AL7G40970 0.5kb downstream 0.5kb downstream 3035   true scaffold_7: 13543496-13546530 Arabidopsis lyrata
AL7G40970 0.5kb downstream 0.5kb downstream 500   false scaffold_7: 13546031-13546530 Arabidopsis lyrata
AL7G40970 1.0kb upstream 1.0kb upstream 3535   true scaffold_7: 13542496-13546030 Arabidopsis lyrata
AL7G40970 1.0kb upstream 1.0kb upstream 1000   false scaffold_7: 13542496-13543495 Arabidopsis lyrata
AL7G40970 1.0kb downstream 1.0kb downstream 3535   true scaffold_7: 13543496-13547030 Arabidopsis lyrata
AL7G40970 1.0kb downstream 1.0kb downstream 1000   false scaffold_7: 13546031-13547030 Arabidopsis lyrata
AL7G40970 2.0kb upstream 2.0kb upstream 4535   true scaffold_7: 13541496-13546030 Arabidopsis lyrata
AL7G40970 2.0kb upstream 2.0kb upstream 2000   false scaffold_7: 13541496-13543495 Arabidopsis lyrata
AL7G40970 2.0kb downstream 2.0kb downstream 4535   true scaffold_7: 13543496-13548030 Arabidopsis lyrata
AL7G40970 2.0kb downstream 2.0kb downstream 2000   false scaffold_7: 13546031-13548030 Arabidopsis lyrata
AL7G40970 5.0kb upstream 5.0kb upstream 7535   true scaffold_7: 13538496-13546030 Arabidopsis lyrata
AL7G40970 5.0kb upstream 5.0kb upstream 5000   false scaffold_7: 13538496-13543495 Arabidopsis lyrata
AL7G40970 5.0kb downstream 5.0kb downstream 7535   true scaffold_7: 13543496-13551030 Arabidopsis lyrata
AL7G40970 5.0kb downstream 5.0kb downstream 5000   false scaffold_7: 13546031-13551030 Arabidopsis lyrata
AL7G40970 10.0kb upstream 10.0kb upstream 12535   true scaffold_7: 13533496-13546030 Arabidopsis lyrata
AL7G40970 10.0kb upstream 10.0kb upstream 10000   false scaffold_7: 13533496-13543495 Arabidopsis lyrata
AL7G40970 10.0kb downstream 10.0kb downstream 12535   true scaffold_7: 13543496-13556030 Arabidopsis lyrata
AL7G40970 10.0kb downstream 10.0kb downstream 10000   false scaffold_7: 13546031-13556030 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368674 5261 Brassicaceae View MSA
123836685 5264 Brassicales-Malvales View MSA
124342961 5266 SBM View MSA
124246015 5268 Malvidae View MSA
124073485 5270 Rosid View MSA
123750353 5271 Pentapetalae View MSA
122787082 5272 Eudicot View MSA
122044204 5273 Angiosperm View MSA
121350970 5274 Embryophyte View MSA
123424805 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain