Gene : AL7G38580 A. lyrata v2.1

Defline:  (1 of 1) PTHR11514:SF53 - TRANSCRIPTION FACTOR BHLH3 Genomic Order:  2715
Name:  ? AL7G38580 Secondary Identifier:  ? PAC:35936022

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL7G38580 0.5kb upstream 0.5kb upstream 2292   true scaffold_7: 12132990-12135281 Arabidopsis lyrata
AL7G38580 0.5kb upstream 0.5kb upstream 500   false scaffold_7: 12134782-12135281 Arabidopsis lyrata
AL7G38580 0.5kb downstream 0.5kb downstream 2292   true scaffold_7: 12132490-12134781 Arabidopsis lyrata
AL7G38580 0.5kb downstream 0.5kb downstream 500   false scaffold_7: 12132490-12132989 Arabidopsis lyrata
AL7G38580 1.0kb upstream 1.0kb upstream 2792   true scaffold_7: 12132990-12135781 Arabidopsis lyrata
AL7G38580 1.0kb upstream 1.0kb upstream 1000   false scaffold_7: 12134782-12135781 Arabidopsis lyrata
AL7G38580 1.0kb downstream 1.0kb downstream 2792   true scaffold_7: 12131990-12134781 Arabidopsis lyrata
AL7G38580 1.0kb downstream 1.0kb downstream 1000   false scaffold_7: 12131990-12132989 Arabidopsis lyrata
AL7G38580 2.0kb upstream 2.0kb upstream 3792   true scaffold_7: 12132990-12136781 Arabidopsis lyrata
AL7G38580 2.0kb upstream 2.0kb upstream 2000   false scaffold_7: 12134782-12136781 Arabidopsis lyrata
AL7G38580 2.0kb downstream 2.0kb downstream 3792   true scaffold_7: 12130990-12134781 Arabidopsis lyrata
AL7G38580 2.0kb downstream 2.0kb downstream 2000   false scaffold_7: 12130990-12132989 Arabidopsis lyrata
AL7G38580 5.0kb upstream 5.0kb upstream 6792   true scaffold_7: 12132990-12139781 Arabidopsis lyrata
AL7G38580 5.0kb upstream 5.0kb upstream 5000   false scaffold_7: 12134782-12139781 Arabidopsis lyrata
AL7G38580 5.0kb downstream 5.0kb downstream 6792   true scaffold_7: 12127990-12134781 Arabidopsis lyrata
AL7G38580 5.0kb downstream 5.0kb downstream 5000   false scaffold_7: 12127990-12132989 Arabidopsis lyrata
AL7G38580 10.0kb upstream 10.0kb upstream 11792   true scaffold_7: 12132990-12144781 Arabidopsis lyrata
AL7G38580 10.0kb upstream 10.0kb upstream 10000   false scaffold_7: 12134782-12144781 Arabidopsis lyrata
AL7G38580 10.0kb downstream 10.0kb downstream 11792   true scaffold_7: 12122990-12134781 Arabidopsis lyrata
AL7G38580 10.0kb downstream 10.0kb downstream 10000   false scaffold_7: 12122990-12132989 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373951 5261 Brassicaceae View MSA
123835989 5264 Brassicales-Malvales View MSA
124349492 5266 SBM View MSA
124241968 5268 Malvidae View MSA
124062097 5270 Rosid View MSA
123736718 5271 Pentapetalae View MSA
122790494 5272 Eudicot View MSA
122049389 5273 Angiosperm View MSA
121351644 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain