Gene : AL7G38470 A. lyrata v2.1

Defline:  (1 of 1) PTHR23315:SF129 - ARMADILLO/BETA-CATENIN-LIKE REPEAT-CONTAINING PROTEIN Genomic Order:  2706
Name:  ? AL7G38470 Secondary Identifier:  ? PAC:35938147

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-7511 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL7G38470 0.5kb upstream 0.5kb upstream 2758   true scaffold_7: 12100576-12103333 Arabidopsis lyrata
AL7G38470 0.5kb upstream 0.5kb upstream 500   false scaffold_7: 12100576-12101075 Arabidopsis lyrata
AL7G38470 0.5kb downstream 0.5kb downstream 2758   true scaffold_7: 12101076-12103833 Arabidopsis lyrata
AL7G38470 0.5kb downstream 0.5kb downstream 500   false scaffold_7: 12103334-12103833 Arabidopsis lyrata
AL7G38470 1.0kb upstream 1.0kb upstream 3258   true scaffold_7: 12100076-12103333 Arabidopsis lyrata
AL7G38470 1.0kb upstream 1.0kb upstream 1000   false scaffold_7: 12100076-12101075 Arabidopsis lyrata
AL7G38470 1.0kb downstream 1.0kb downstream 3258   true scaffold_7: 12101076-12104333 Arabidopsis lyrata
AL7G38470 1.0kb downstream 1.0kb downstream 1000   false scaffold_7: 12103334-12104333 Arabidopsis lyrata
AL7G38470 2.0kb upstream 2.0kb upstream 4258   true scaffold_7: 12099076-12103333 Arabidopsis lyrata
AL7G38470 2.0kb upstream 2.0kb upstream 2000   false scaffold_7: 12099076-12101075 Arabidopsis lyrata
AL7G38470 2.0kb downstream 2.0kb downstream 4258   true scaffold_7: 12101076-12105333 Arabidopsis lyrata
AL7G38470 2.0kb downstream 2.0kb downstream 2000   false scaffold_7: 12103334-12105333 Arabidopsis lyrata
AL7G38470 5.0kb upstream 5.0kb upstream 7258   true scaffold_7: 12096076-12103333 Arabidopsis lyrata
AL7G38470 5.0kb upstream 5.0kb upstream 5000   false scaffold_7: 12096076-12101075 Arabidopsis lyrata
AL7G38470 5.0kb downstream 5.0kb downstream 7258   true scaffold_7: 12101076-12108333 Arabidopsis lyrata
AL7G38470 5.0kb downstream 5.0kb downstream 5000   false scaffold_7: 12103334-12108333 Arabidopsis lyrata
AL7G38470 10.0kb upstream 10.0kb upstream 12258   true scaffold_7: 12091076-12103333 Arabidopsis lyrata
AL7G38470 10.0kb upstream 10.0kb upstream 10000   false scaffold_7: 12091076-12101075 Arabidopsis lyrata
AL7G38470 10.0kb downstream 10.0kb downstream 12258   true scaffold_7: 12101076-12113333 Arabidopsis lyrata
AL7G38470 10.0kb downstream 10.0kb downstream 10000   false scaffold_7: 12103334-12113333 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363455 5261 Brassicaceae View MSA
123830839 5264 Brassicales-Malvales View MSA
124336587 5266 SBM View MSA
124239791 5268 Malvidae View MSA
124065443 5270 Rosid View MSA
123751031 5271 Pentapetalae View MSA
122790381 5272 Eudicot View MSA
122043929 5273 Angiosperm View MSA
121350406 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain