Gene : AL7G39040 A. lyrata v2.1

Defline:  (1 of 2) 2.7.1.46 - L-arabinokinase Genomic Order:  2757
Name:  ? AL7G39040 Secondary Identifier:  ? PAC:35940009

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-82 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL7G39040 0.5kb upstream 0.5kb upstream 7775   true scaffold_7: 12392973-12400747 Arabidopsis lyrata
AL7G39040 0.5kb upstream 0.5kb upstream 500   false scaffold_7: 12400248-12400747 Arabidopsis lyrata
AL7G39040 0.5kb downstream 0.5kb downstream 7775   true scaffold_7: 12392473-12400247 Arabidopsis lyrata
AL7G39040 0.5kb downstream 0.5kb downstream 500   false scaffold_7: 12392473-12392972 Arabidopsis lyrata
AL7G39040 1.0kb upstream 1.0kb upstream 8275   true scaffold_7: 12392973-12401247 Arabidopsis lyrata
AL7G39040 1.0kb upstream 1.0kb upstream 1000   false scaffold_7: 12400248-12401247 Arabidopsis lyrata
AL7G39040 1.0kb downstream 1.0kb downstream 8275   true scaffold_7: 12391973-12400247 Arabidopsis lyrata
AL7G39040 1.0kb downstream 1.0kb downstream 1000   false scaffold_7: 12391973-12392972 Arabidopsis lyrata
AL7G39040 2.0kb upstream 2.0kb upstream 9275   true scaffold_7: 12392973-12402247 Arabidopsis lyrata
AL7G39040 2.0kb upstream 2.0kb upstream 2000   false scaffold_7: 12400248-12402247 Arabidopsis lyrata
AL7G39040 2.0kb downstream 2.0kb downstream 9275   true scaffold_7: 12390973-12400247 Arabidopsis lyrata
AL7G39040 2.0kb downstream 2.0kb downstream 2000   false scaffold_7: 12390973-12392972 Arabidopsis lyrata
AL7G39040 5.0kb upstream 5.0kb upstream 12275   true scaffold_7: 12392973-12405247 Arabidopsis lyrata
AL7G39040 5.0kb upstream 5.0kb upstream 5000   false scaffold_7: 12400248-12405247 Arabidopsis lyrata
AL7G39040 5.0kb downstream 5.0kb downstream 12275   true scaffold_7: 12387973-12400247 Arabidopsis lyrata
AL7G39040 5.0kb downstream 5.0kb downstream 5000   false scaffold_7: 12387973-12392972 Arabidopsis lyrata
AL7G39040 10.0kb upstream 10.0kb upstream 17275   true scaffold_7: 12392973-12410247 Arabidopsis lyrata
AL7G39040 10.0kb upstream 10.0kb upstream 10000   false scaffold_7: 12400248-12410247 Arabidopsis lyrata
AL7G39040 10.0kb downstream 10.0kb downstream 17275   true scaffold_7: 12382973-12400247 Arabidopsis lyrata
AL7G39040 10.0kb downstream 10.0kb downstream 10000   false scaffold_7: 12382973-12392972 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370489 5261 Brassicaceae View MSA
123834106 5264 Brassicales-Malvales View MSA
124336596 5266 SBM View MSA
124242808 5268 Malvidae View MSA
124063357 5270 Rosid View MSA
123744762 5271 Pentapetalae View MSA
122790860 5272 Eudicot View MSA
122044133 5273 Angiosperm View MSA
121345310 5274 Embryophyte View MSA
123424614 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain