Gene : AL7G36560 A. lyrata v2.1

Defline:  (1 of 2) PTHR31500:SF17 - AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN Genomic Order:  2525
Name:  ? AL7G36560 Secondary Identifier:  ? PAC:35937472

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL7G36560 0.5kb upstream 0.5kb upstream 2728   true scaffold_7: 11157092-11159819 Arabidopsis lyrata
AL7G36560 0.5kb upstream 0.5kb upstream 500   false scaffold_7: 11157092-11157591 Arabidopsis lyrata
AL7G36560 0.5kb downstream 0.5kb downstream 2728   true scaffold_7: 11157592-11160319 Arabidopsis lyrata
AL7G36560 0.5kb downstream 0.5kb downstream 500   false scaffold_7: 11159820-11160319 Arabidopsis lyrata
AL7G36560 1.0kb upstream 1.0kb upstream 3228   true scaffold_7: 11156592-11159819 Arabidopsis lyrata
AL7G36560 1.0kb upstream 1.0kb upstream 1000   false scaffold_7: 11156592-11157591 Arabidopsis lyrata
AL7G36560 1.0kb downstream 1.0kb downstream 3228   true scaffold_7: 11157592-11160819 Arabidopsis lyrata
AL7G36560 1.0kb downstream 1.0kb downstream 1000   false scaffold_7: 11159820-11160819 Arabidopsis lyrata
AL7G36560 2.0kb upstream 2.0kb upstream 4228   true scaffold_7: 11155592-11159819 Arabidopsis lyrata
AL7G36560 2.0kb upstream 2.0kb upstream 2000   false scaffold_7: 11155592-11157591 Arabidopsis lyrata
AL7G36560 2.0kb downstream 2.0kb downstream 4228   true scaffold_7: 11157592-11161819 Arabidopsis lyrata
AL7G36560 2.0kb downstream 2.0kb downstream 2000   false scaffold_7: 11159820-11161819 Arabidopsis lyrata
AL7G36560 5.0kb upstream 5.0kb upstream 7228   true scaffold_7: 11152592-11159819 Arabidopsis lyrata
AL7G36560 5.0kb upstream 5.0kb upstream 5000   false scaffold_7: 11152592-11157591 Arabidopsis lyrata
AL7G36560 5.0kb downstream 5.0kb downstream 7228   true scaffold_7: 11157592-11164819 Arabidopsis lyrata
AL7G36560 5.0kb downstream 5.0kb downstream 5000   false scaffold_7: 11159820-11164819 Arabidopsis lyrata
AL7G36560 10.0kb upstream 10.0kb upstream 12228   true scaffold_7: 11147592-11159819 Arabidopsis lyrata
AL7G36560 10.0kb upstream 10.0kb upstream 10000   false scaffold_7: 11147592-11157591 Arabidopsis lyrata
AL7G36560 10.0kb downstream 10.0kb downstream 12228   true scaffold_7: 11157592-11169819 Arabidopsis lyrata
AL7G36560 10.0kb downstream 10.0kb downstream 10000   false scaffold_7: 11159820-11169819 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364389 5261 Brassicaceae View MSA
123839060 5264 Brassicales-Malvales View MSA
124346948 5266 SBM View MSA
124250687 5268 Malvidae View MSA
124064410 5270 Rosid View MSA
123753724 5271 Pentapetalae View MSA
122796118 5272 Eudicot View MSA
122049850 5273 Angiosperm View MSA
121348420 5274 Embryophyte View MSA
123380859 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain