Gene : AL8G12170 A. lyrata v2.1

Defline:  (1 of 2) PTHR11712:SF226 - 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE I, CHLOROPLASTIC Genomic Order:  201
Name:  ? AL8G12170 Secondary Identifier:  ? PAC:35949453

Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata FASYN-ELONG-PWY Arabidopsis lyrata pathologic  
Alyrata PWY-5156 Arabidopsis lyrata pathologic  
Alyrata PWY-5971 Arabidopsis lyrata pathologic  
Alyrata PWY-5989 Arabidopsis lyrata pathologic  
Alyrata PWY-6282 Arabidopsis lyrata pathologic  
Alyrata PWY-7388 Arabidopsis lyrata pathologic  
Alyrata PWY-7663 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL8G12170 0.5kb upstream 0.5kb upstream 3122   true scaffold_8: 1077016-1080137 Arabidopsis lyrata
AL8G12170 0.5kb upstream 0.5kb upstream 500   false scaffold_8: 1077016-1077515 Arabidopsis lyrata
AL8G12170 0.5kb downstream 0.5kb downstream 3122   true scaffold_8: 1077516-1080637 Arabidopsis lyrata
AL8G12170 0.5kb downstream 0.5kb downstream 500   false scaffold_8: 1080138-1080637 Arabidopsis lyrata
AL8G12170 1.0kb upstream 1.0kb upstream 3622   true scaffold_8: 1076516-1080137 Arabidopsis lyrata
AL8G12170 1.0kb upstream 1.0kb upstream 1000   false scaffold_8: 1076516-1077515 Arabidopsis lyrata
AL8G12170 1.0kb downstream 1.0kb downstream 3622   true scaffold_8: 1077516-1081137 Arabidopsis lyrata
AL8G12170 1.0kb downstream 1.0kb downstream 1000   false scaffold_8: 1080138-1081137 Arabidopsis lyrata
AL8G12170 2.0kb upstream 2.0kb upstream 4622   true scaffold_8: 1075516-1080137 Arabidopsis lyrata
AL8G12170 2.0kb upstream 2.0kb upstream 2000   false scaffold_8: 1075516-1077515 Arabidopsis lyrata
AL8G12170 2.0kb downstream 2.0kb downstream 4622   true scaffold_8: 1077516-1082137 Arabidopsis lyrata
AL8G12170 2.0kb downstream 2.0kb downstream 2000   false scaffold_8: 1080138-1082137 Arabidopsis lyrata
AL8G12170 5.0kb upstream 5.0kb upstream 7622   true scaffold_8: 1072516-1080137 Arabidopsis lyrata
AL8G12170 5.0kb upstream 5.0kb upstream 5000   false scaffold_8: 1072516-1077515 Arabidopsis lyrata
AL8G12170 5.0kb downstream 5.0kb downstream 7622   true scaffold_8: 1077516-1085137 Arabidopsis lyrata
AL8G12170 5.0kb downstream 5.0kb downstream 5000   false scaffold_8: 1080138-1085137 Arabidopsis lyrata
AL8G12170 10.0kb upstream 10.0kb upstream 12622   true scaffold_8: 1067516-1080137 Arabidopsis lyrata
AL8G12170 10.0kb upstream 10.0kb upstream 10000   false scaffold_8: 1067516-1077515 Arabidopsis lyrata
AL8G12170 10.0kb downstream 10.0kb downstream 12622   true scaffold_8: 1077516-1090137 Arabidopsis lyrata
AL8G12170 10.0kb downstream 10.0kb downstream 10000   false scaffold_8: 1080138-1090137 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363213 5261 Brassicaceae View MSA
123833977 5264 Brassicales-Malvales View MSA
124343776 5266 SBM View MSA
124240584 5268 Malvidae View MSA
124064004 5270 Rosid View MSA
123747178 5271 Pentapetalae View MSA
122792015 5272 Eudicot View MSA
122044089 5273 Angiosperm View MSA
121347391 5274 Embryophyte View MSA
123426303 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain