Gene : AL8G10250 A. lyrata v2.1

Defline:  (1 of 6) K02942 - large subunit ribosomal protein LP1 (RP-LP1, RPLP1) Genomic Order:  21
Name:  ? AL8G10250 Secondary Identifier:  ? PAC:35948425

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0 Pathways

Genomics

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Gene Structure Displayer

Expression

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL8G10250 0.5kb upstream 0.5kb upstream 2635   true scaffold_8: 79106-81740 Arabidopsis lyrata
AL8G10250 0.5kb upstream 0.5kb upstream 500   false scaffold_8: 79106-79605 Arabidopsis lyrata
AL8G10250 0.5kb downstream 0.5kb downstream 2635   true scaffold_8: 79606-82240 Arabidopsis lyrata
AL8G10250 0.5kb downstream 0.5kb downstream 500   false scaffold_8: 81741-82240 Arabidopsis lyrata
AL8G10250 1.0kb upstream 1.0kb upstream 3135   true scaffold_8: 78606-81740 Arabidopsis lyrata
AL8G10250 1.0kb upstream 1.0kb upstream 1000   false scaffold_8: 78606-79605 Arabidopsis lyrata
AL8G10250 1.0kb downstream 1.0kb downstream 3135   true scaffold_8: 79606-82740 Arabidopsis lyrata
AL8G10250 1.0kb downstream 1.0kb downstream 1000   false scaffold_8: 81741-82740 Arabidopsis lyrata
AL8G10250 2.0kb upstream 2.0kb upstream 4135   true scaffold_8: 77606-81740 Arabidopsis lyrata
AL8G10250 2.0kb upstream 2.0kb upstream 2000   false scaffold_8: 77606-79605 Arabidopsis lyrata
AL8G10250 2.0kb downstream 2.0kb downstream 4135   true scaffold_8: 79606-83740 Arabidopsis lyrata
AL8G10250 2.0kb downstream 2.0kb downstream 2000   false scaffold_8: 81741-83740 Arabidopsis lyrata
AL8G10250 5.0kb upstream 5.0kb upstream 7135   true scaffold_8: 74606-81740 Arabidopsis lyrata
AL8G10250 5.0kb upstream 5.0kb upstream 5000   false scaffold_8: 74606-79605 Arabidopsis lyrata
AL8G10250 5.0kb downstream 5.0kb downstream 7135   true scaffold_8: 79606-86740 Arabidopsis lyrata
AL8G10250 5.0kb downstream 5.0kb downstream 5000   false scaffold_8: 81741-86740 Arabidopsis lyrata
AL8G10250 10.0kb upstream 10.0kb upstream 12135   true scaffold_8: 69606-81740 Arabidopsis lyrata
AL8G10250 10.0kb upstream 10.0kb upstream 10000   false scaffold_8: 69606-79605 Arabidopsis lyrata
AL8G10250 10.0kb downstream 10.0kb downstream 12135   true scaffold_8: 79606-91740 Arabidopsis lyrata
AL8G10250 10.0kb downstream 10.0kb downstream 10000   false scaffold_8: 81741-91740 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122326609 5261 Brassicaceae Singleton cluster - no MSA
123768071 5264 Brassicales-Malvales Singleton cluster - no MSA
124346847 5266 SBM View MSA
124250249 5268 Malvidae View MSA
124074239 5270 Rosid View MSA
123751356 5271 Pentapetalae View MSA
122787708 5272 Eudicot View MSA
122049908 5273 Angiosperm View MSA
121345630 5274 Embryophyte View MSA
123424644 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain