Gene : AL8G10230 A. lyrata v2.1

Defline:  (1 of 2) 2.3.1.9 - Acetyl-CoA C-acetyltransferase / Acetoacetyl-CoA thiolase Genomic Order:  19
Name:  ? AL8G10230 Secondary Identifier:  ? PAC:35948363

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata ILEUDEG-PWY Arabidopsis lyrata pathologic  
Alyrata PWY-5910 Arabidopsis lyrata pathologic  
Alyrata PWY-922 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL8G10230 0.5kb upstream 0.5kb upstream 3121   true scaffold_8: 71811-74931 Arabidopsis lyrata
AL8G10230 0.5kb upstream 0.5kb upstream 500   false scaffold_8: 74432-74931 Arabidopsis lyrata
AL8G10230 0.5kb downstream 0.5kb downstream 3121   true scaffold_8: 71311-74431 Arabidopsis lyrata
AL8G10230 0.5kb downstream 0.5kb downstream 500   false scaffold_8: 71311-71810 Arabidopsis lyrata
AL8G10230 1.0kb upstream 1.0kb upstream 3621   true scaffold_8: 71811-75431 Arabidopsis lyrata
AL8G10230 1.0kb upstream 1.0kb upstream 1000   false scaffold_8: 74432-75431 Arabidopsis lyrata
AL8G10230 1.0kb downstream 1.0kb downstream 3621   true scaffold_8: 70811-74431 Arabidopsis lyrata
AL8G10230 1.0kb downstream 1.0kb downstream 1000   false scaffold_8: 70811-71810 Arabidopsis lyrata
AL8G10230 2.0kb upstream 2.0kb upstream 4621   true scaffold_8: 71811-76431 Arabidopsis lyrata
AL8G10230 2.0kb upstream 2.0kb upstream 2000   false scaffold_8: 74432-76431 Arabidopsis lyrata
AL8G10230 2.0kb downstream 2.0kb downstream 4621   true scaffold_8: 69811-74431 Arabidopsis lyrata
AL8G10230 2.0kb downstream 2.0kb downstream 2000   false scaffold_8: 69811-71810 Arabidopsis lyrata
AL8G10230 5.0kb upstream 5.0kb upstream 7621   true scaffold_8: 71811-79431 Arabidopsis lyrata
AL8G10230 5.0kb upstream 5.0kb upstream 5000   false scaffold_8: 74432-79431 Arabidopsis lyrata
AL8G10230 5.0kb downstream 5.0kb downstream 7621   true scaffold_8: 66811-74431 Arabidopsis lyrata
AL8G10230 5.0kb downstream 5.0kb downstream 5000   false scaffold_8: 66811-71810 Arabidopsis lyrata
AL8G10230 10.0kb upstream 10.0kb upstream 12621   true scaffold_8: 71811-84431 Arabidopsis lyrata
AL8G10230 10.0kb upstream 10.0kb upstream 10000   false scaffold_8: 74432-84431 Arabidopsis lyrata
AL8G10230 10.0kb downstream 10.0kb downstream 12621   true scaffold_8: 61811-74431 Arabidopsis lyrata
AL8G10230 10.0kb downstream 10.0kb downstream 10000   false scaffold_8: 61811-71810 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366362 5261 Brassicaceae View MSA
123830193 5264 Brassicales-Malvales View MSA
124338092 5266 SBM View MSA
124247085 5268 Malvidae View MSA
124066506 5270 Rosid View MSA
123747270 5271 Pentapetalae View MSA
122788364 5272 Eudicot View MSA
122045789 5273 Angiosperm View MSA
121344005 5274 Embryophyte View MSA
123427573 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain