Gene : AL8G28870 A. lyrata v2.1

Defline:  (1 of 6) 1.1.1.39 - Malate dehydrogenase (decarboxylating) / Pyruvic-malic carboxylase Genomic Order:  1665
Name:  ? AL8G28870 Secondary Identifier:  ? PAC:35949904

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata GLUCONEO-PWY Arabidopsis lyrata pathologic  
Alyrata PWY-7115 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL8G28870 0.5kb upstream 0.5kb upstream 1218   true scaffold_8: 16084121-16085338 Arabidopsis lyrata
AL8G28870 0.5kb upstream 0.5kb upstream 500   false scaffold_8: 16084121-16084620 Arabidopsis lyrata
AL8G28870 0.5kb downstream 0.5kb downstream 1218   true scaffold_8: 16084621-16085838 Arabidopsis lyrata
AL8G28870 0.5kb downstream 0.5kb downstream 500   false scaffold_8: 16085339-16085838 Arabidopsis lyrata
AL8G28870 1.0kb upstream 1.0kb upstream 1718   true scaffold_8: 16083621-16085338 Arabidopsis lyrata
AL8G28870 1.0kb upstream 1.0kb upstream 1000   false scaffold_8: 16083621-16084620 Arabidopsis lyrata
AL8G28870 1.0kb downstream 1.0kb downstream 1718   true scaffold_8: 16084621-16086338 Arabidopsis lyrata
AL8G28870 1.0kb downstream 1.0kb downstream 1000   false scaffold_8: 16085339-16086338 Arabidopsis lyrata
AL8G28870 2.0kb upstream 2.0kb upstream 2718   true scaffold_8: 16082621-16085338 Arabidopsis lyrata
AL8G28870 2.0kb upstream 2.0kb upstream 2000   false scaffold_8: 16082621-16084620 Arabidopsis lyrata
AL8G28870 2.0kb downstream 2.0kb downstream 2718   true scaffold_8: 16084621-16087338 Arabidopsis lyrata
AL8G28870 2.0kb downstream 2.0kb downstream 2000   false scaffold_8: 16085339-16087338 Arabidopsis lyrata
AL8G28870 5.0kb upstream 5.0kb upstream 5718   true scaffold_8: 16079621-16085338 Arabidopsis lyrata
AL8G28870 5.0kb upstream 5.0kb upstream 5000   false scaffold_8: 16079621-16084620 Arabidopsis lyrata
AL8G28870 5.0kb downstream 5.0kb downstream 5718   true scaffold_8: 16084621-16090338 Arabidopsis lyrata
AL8G28870 5.0kb downstream 5.0kb downstream 5000   false scaffold_8: 16085339-16090338 Arabidopsis lyrata
AL8G28870 10.0kb upstream 10.0kb upstream 10718   true scaffold_8: 16074621-16085338 Arabidopsis lyrata
AL8G28870 10.0kb upstream 10.0kb upstream 10000   false scaffold_8: 16074621-16084620 Arabidopsis lyrata
AL8G28870 10.0kb downstream 10.0kb downstream 10718   true scaffold_8: 16084621-16095338 Arabidopsis lyrata
AL8G28870 10.0kb downstream 10.0kb downstream 10000   false scaffold_8: 16085339-16095338 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371722 5261 Brassicaceae View MSA
123838955 5264 Brassicales-Malvales View MSA
124337448 5266 SBM View MSA
124248730 5268 Malvidae View MSA
124073264 5270 Rosid View MSA
123749202 5271 Pentapetalae View MSA
122796678 5272 Eudicot View MSA
122050999 5273 Angiosperm View MSA
121350297 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain