Gene : AL8G10540 A. lyrata v2.1
Defline:  (1 of 3) PTHR13402 - RGPR-RELATED Genomic Order:  49
Name:  ? AL8G10540 Secondary Identifier:  ? PAC:35950911
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL8G10540 0.5kb upstream 0.5kb upstream 5172   true scaffold_8: 171006-176177 Arabidopsis lyrata
AL8G10540 0.5kb upstream 0.5kb upstream 500   false scaffold_8: 171006-171505 Arabidopsis lyrata
AL8G10540 0.5kb downstream 0.5kb downstream 5172   true scaffold_8: 171506-176677 Arabidopsis lyrata
AL8G10540 0.5kb downstream 0.5kb downstream 500   false scaffold_8: 176178-176677 Arabidopsis lyrata
AL8G10540 1.0kb upstream 1.0kb upstream 5672   true scaffold_8: 170506-176177 Arabidopsis lyrata
AL8G10540 1.0kb upstream 1.0kb upstream 1000   false scaffold_8: 170506-171505 Arabidopsis lyrata
AL8G10540 1.0kb downstream 1.0kb downstream 5672   true scaffold_8: 171506-177177 Arabidopsis lyrata
AL8G10540 1.0kb downstream 1.0kb downstream 1000   false scaffold_8: 176178-177177 Arabidopsis lyrata
AL8G10540 2.0kb upstream 2.0kb upstream 6672   true scaffold_8: 169506-176177 Arabidopsis lyrata
AL8G10540 2.0kb upstream 2.0kb upstream 2000   false scaffold_8: 169506-171505 Arabidopsis lyrata
AL8G10540 2.0kb downstream 2.0kb downstream 6672   true scaffold_8: 171506-178177 Arabidopsis lyrata
AL8G10540 2.0kb downstream 2.0kb downstream 2000   false scaffold_8: 176178-178177 Arabidopsis lyrata
AL8G10540 5.0kb upstream 5.0kb upstream 9672   true scaffold_8: 166506-176177 Arabidopsis lyrata
AL8G10540 5.0kb upstream 5.0kb upstream 5000   false scaffold_8: 166506-171505 Arabidopsis lyrata
AL8G10540 5.0kb downstream 5.0kb downstream 9672   true scaffold_8: 171506-181177 Arabidopsis lyrata
AL8G10540 5.0kb downstream 5.0kb downstream 5000   false scaffold_8: 176178-181177 Arabidopsis lyrata
AL8G10540 10.0kb upstream 10.0kb upstream 14672   true scaffold_8: 161506-176177 Arabidopsis lyrata
AL8G10540 10.0kb upstream 10.0kb upstream 10000   false scaffold_8: 161506-171505 Arabidopsis lyrata
AL8G10540 10.0kb downstream 10.0kb downstream 14672   true scaffold_8: 171506-186177 Arabidopsis lyrata
AL8G10540 10.0kb downstream 10.0kb downstream 10000   false scaffold_8: 176178-186177 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122326952 5261 Brassicaceae Singleton cluster - no MSA
123841813 5264 Brassicales-Malvales View MSA
124323043 5266 SBM View MSA
124254140 5268 Malvidae View MSA
124072884 5270 Rosid View MSA
123746128 5271 Pentapetalae View MSA
122793039 5272 Eudicot View MSA
122051498 5273 Angiosperm View MSA
121349781 5274 Embryophyte View MSA
123425826 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain