Gene : AL7G52530 A. lyrata v2.1

Defline:  (1 of 2) PF00069//PF00314 - Protein kinase domain (Pkinase) // Thaumatin family (Thaumatin) Genomic Order:  3934
Name:  ? AL7G52530 Secondary Identifier:  ? PAC:35938596

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-7409 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL7G52530 0.5kb upstream 0.5kb upstream 6482   true scaffold_7: 24195038-24201519 Arabidopsis lyrata
AL7G52530 0.5kb upstream 0.5kb upstream 500   false scaffold_7: 24195038-24195537 Arabidopsis lyrata
AL7G52530 0.5kb downstream 0.5kb downstream 6482   true scaffold_7: 24195538-24202019 Arabidopsis lyrata
AL7G52530 0.5kb downstream 0.5kb downstream 500   false scaffold_7: 24201520-24202019 Arabidopsis lyrata
AL7G52530 1.0kb upstream 1.0kb upstream 6982   true scaffold_7: 24194538-24201519 Arabidopsis lyrata
AL7G52530 1.0kb upstream 1.0kb upstream 1000   false scaffold_7: 24194538-24195537 Arabidopsis lyrata
AL7G52530 1.0kb downstream 1.0kb downstream 6982   true scaffold_7: 24195538-24202519 Arabidopsis lyrata
AL7G52530 1.0kb downstream 1.0kb downstream 1000   false scaffold_7: 24201520-24202519 Arabidopsis lyrata
AL7G52530 2.0kb upstream 2.0kb upstream 7982   true scaffold_7: 24193538-24201519 Arabidopsis lyrata
AL7G52530 2.0kb upstream 2.0kb upstream 2000   false scaffold_7: 24193538-24195537 Arabidopsis lyrata
AL7G52530 2.0kb downstream 2.0kb downstream 7982   true scaffold_7: 24195538-24203519 Arabidopsis lyrata
AL7G52530 2.0kb downstream 2.0kb downstream 2000   false scaffold_7: 24201520-24203519 Arabidopsis lyrata
AL7G52530 5.0kb upstream 5.0kb upstream 10982   true scaffold_7: 24190538-24201519 Arabidopsis lyrata
AL7G52530 5.0kb upstream 5.0kb upstream 5000   false scaffold_7: 24190538-24195537 Arabidopsis lyrata
AL7G52530 5.0kb downstream 5.0kb downstream 10982   true scaffold_7: 24195538-24206519 Arabidopsis lyrata
AL7G52530 5.0kb downstream 5.0kb downstream 5000   false scaffold_7: 24201520-24206519 Arabidopsis lyrata
AL7G52530 10.0kb upstream 10.0kb upstream 15982   true scaffold_7: 24185538-24201519 Arabidopsis lyrata
AL7G52530 10.0kb upstream 10.0kb upstream 10000   false scaffold_7: 24185538-24195537 Arabidopsis lyrata
AL7G52530 10.0kb downstream 10.0kb downstream 15982   true scaffold_7: 24195538-24211519 Arabidopsis lyrata
AL7G52530 10.0kb downstream 10.0kb downstream 10000   false scaffold_7: 24201520-24211519 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381708 5261 Brassicaceae View MSA
123841678 5264 Brassicales-Malvales View MSA
124350842 5266 SBM View MSA
124254633 5268 Malvidae View MSA
124074937 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain