Gene : AL7G51610 A. lyrata v2.1

Defline:  (1 of 3) K01883 - cysteinyl-tRNA synthetase (CARS, cysS) Genomic Order:  3855
Name:  ? AL7G51610 Secondary Identifier:  ? PAC:35936093

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata TRNA-CHARGING-PWY Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL7G51610 0.5kb upstream 0.5kb upstream 3320   true scaffold_7: 23605031-23608350 Arabidopsis lyrata
AL7G51610 0.5kb upstream 0.5kb upstream 500   false scaffold_7: 23605031-23605530 Arabidopsis lyrata
AL7G51610 0.5kb downstream 0.5kb downstream 3320   true scaffold_7: 23605531-23608850 Arabidopsis lyrata
AL7G51610 0.5kb downstream 0.5kb downstream 500   false scaffold_7: 23608351-23608850 Arabidopsis lyrata
AL7G51610 1.0kb upstream 1.0kb upstream 3820   true scaffold_7: 23604531-23608350 Arabidopsis lyrata
AL7G51610 1.0kb upstream 1.0kb upstream 1000   false scaffold_7: 23604531-23605530 Arabidopsis lyrata
AL7G51610 1.0kb downstream 1.0kb downstream 3820   true scaffold_7: 23605531-23609350 Arabidopsis lyrata
AL7G51610 1.0kb downstream 1.0kb downstream 1000   false scaffold_7: 23608351-23609350 Arabidopsis lyrata
AL7G51610 2.0kb upstream 2.0kb upstream 4820   true scaffold_7: 23603531-23608350 Arabidopsis lyrata
AL7G51610 2.0kb upstream 2.0kb upstream 2000   false scaffold_7: 23603531-23605530 Arabidopsis lyrata
AL7G51610 2.0kb downstream 2.0kb downstream 4820   true scaffold_7: 23605531-23610350 Arabidopsis lyrata
AL7G51610 2.0kb downstream 2.0kb downstream 2000   false scaffold_7: 23608351-23610350 Arabidopsis lyrata
AL7G51610 5.0kb upstream 5.0kb upstream 7820   true scaffold_7: 23600531-23608350 Arabidopsis lyrata
AL7G51610 5.0kb upstream 5.0kb upstream 5000   false scaffold_7: 23600531-23605530 Arabidopsis lyrata
AL7G51610 5.0kb downstream 5.0kb downstream 7820   true scaffold_7: 23605531-23613350 Arabidopsis lyrata
AL7G51610 5.0kb downstream 5.0kb downstream 5000   false scaffold_7: 23608351-23613350 Arabidopsis lyrata
AL7G51610 10.0kb upstream 10.0kb upstream 12820   true scaffold_7: 23595531-23608350 Arabidopsis lyrata
AL7G51610 10.0kb upstream 10.0kb upstream 10000   false scaffold_7: 23595531-23605530 Arabidopsis lyrata
AL7G51610 10.0kb downstream 10.0kb downstream 12820   true scaffold_7: 23605531-23618350 Arabidopsis lyrata
AL7G51610 10.0kb downstream 10.0kb downstream 10000   false scaffold_7: 23608351-23618350 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374120 5261 Brassicaceae View MSA
123830894 5264 Brassicales-Malvales View MSA
124340438 5266 SBM View MSA
124250049 5268 Malvidae View MSA
124063129 5270 Rosid View MSA
123736819 5271 Pentapetalae View MSA
122791424 5272 Eudicot View MSA
122050932 5273 Angiosperm View MSA
121350340 5274 Embryophyte View MSA
123427761 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain