Gene : AL7G49190 A. lyrata v2.1

Defline:  (1 of 1) PTHR11728:SF8 - GLYCEROL-3-PHOSPHATE DEHYDROGENASE [NAD(+)], CYTOPLASMIC Genomic Order:  3639
Name:  ? AL7G49190 Secondary Identifier:  ? PAC:35938820

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-6118 Arabidopsis lyrata pathologic  
Alyrata PWY-7411 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL7G49190 0.5kb upstream 0.5kb upstream 3038   true scaffold_7: 22128384-22131421 Arabidopsis lyrata
AL7G49190 0.5kb upstream 0.5kb upstream 500   false scaffold_7: 22128384-22128883 Arabidopsis lyrata
AL7G49190 0.5kb downstream 0.5kb downstream 3038   true scaffold_7: 22128884-22131921 Arabidopsis lyrata
AL7G49190 0.5kb downstream 0.5kb downstream 500   false scaffold_7: 22131422-22131921 Arabidopsis lyrata
AL7G49190 1.0kb upstream 1.0kb upstream 3538   true scaffold_7: 22127884-22131421 Arabidopsis lyrata
AL7G49190 1.0kb upstream 1.0kb upstream 1000   false scaffold_7: 22127884-22128883 Arabidopsis lyrata
AL7G49190 1.0kb downstream 1.0kb downstream 3538   true scaffold_7: 22128884-22132421 Arabidopsis lyrata
AL7G49190 1.0kb downstream 1.0kb downstream 1000   false scaffold_7: 22131422-22132421 Arabidopsis lyrata
AL7G49190 2.0kb upstream 2.0kb upstream 4538   true scaffold_7: 22126884-22131421 Arabidopsis lyrata
AL7G49190 2.0kb upstream 2.0kb upstream 2000   false scaffold_7: 22126884-22128883 Arabidopsis lyrata
AL7G49190 2.0kb downstream 2.0kb downstream 4538   true scaffold_7: 22128884-22133421 Arabidopsis lyrata
AL7G49190 2.0kb downstream 2.0kb downstream 2000   false scaffold_7: 22131422-22133421 Arabidopsis lyrata
AL7G49190 5.0kb upstream 5.0kb upstream 7538   true scaffold_7: 22123884-22131421 Arabidopsis lyrata
AL7G49190 5.0kb upstream 5.0kb upstream 5000   false scaffold_7: 22123884-22128883 Arabidopsis lyrata
AL7G49190 5.0kb downstream 5.0kb downstream 7538   true scaffold_7: 22128884-22136421 Arabidopsis lyrata
AL7G49190 5.0kb downstream 5.0kb downstream 5000   false scaffold_7: 22131422-22136421 Arabidopsis lyrata
AL7G49190 10.0kb upstream 10.0kb upstream 12538   true scaffold_7: 22118884-22131421 Arabidopsis lyrata
AL7G49190 10.0kb upstream 10.0kb upstream 10000   false scaffold_7: 22118884-22128883 Arabidopsis lyrata
AL7G49190 10.0kb downstream 10.0kb downstream 12538   true scaffold_7: 22128884-22141421 Arabidopsis lyrata
AL7G49190 10.0kb downstream 10.0kb downstream 10000   false scaffold_7: 22131422-22141421 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363698 5261 Brassicaceae View MSA
123832123 5264 Brassicales-Malvales View MSA
124342292 5266 SBM View MSA
124243954 5268 Malvidae View MSA
124071828 5270 Rosid View MSA
123739883 5271 Pentapetalae View MSA
122793723 5272 Eudicot View MSA
122048104 5273 Angiosperm View MSA
121348116 5274 Embryophyte View MSA
123428470 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain