Gene : AL7G49880 A. lyrata v2.1

Defline:  (1 of 5) PTHR31517:SF11 - PEROXIDASE 31-RELATED Genomic Order:  3700
Name:  ? AL7G49880 Secondary Identifier:  ? PAC:35939680

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5466 Arabidopsis lyrata pathologic  
Alyrata PWY-7214 Arabidopsis lyrata pathologic  
Alyrata PWY-7445 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL7G49880 0.5kb upstream 0.5kb upstream 1865   true scaffold_7: 22563062-22564926 Arabidopsis lyrata
AL7G49880 0.5kb upstream 0.5kb upstream 500   false scaffold_7: 22563062-22563561 Arabidopsis lyrata
AL7G49880 0.5kb downstream 0.5kb downstream 1865   true scaffold_7: 22563562-22565426 Arabidopsis lyrata
AL7G49880 0.5kb downstream 0.5kb downstream 500   false scaffold_7: 22564927-22565426 Arabidopsis lyrata
AL7G49880 1.0kb upstream 1.0kb upstream 2365   true scaffold_7: 22562562-22564926 Arabidopsis lyrata
AL7G49880 1.0kb upstream 1.0kb upstream 1000   false scaffold_7: 22562562-22563561 Arabidopsis lyrata
AL7G49880 1.0kb downstream 1.0kb downstream 2365   true scaffold_7: 22563562-22565926 Arabidopsis lyrata
AL7G49880 1.0kb downstream 1.0kb downstream 1000   false scaffold_7: 22564927-22565926 Arabidopsis lyrata
AL7G49880 2.0kb upstream 2.0kb upstream 3365   true scaffold_7: 22561562-22564926 Arabidopsis lyrata
AL7G49880 2.0kb upstream 2.0kb upstream 2000   false scaffold_7: 22561562-22563561 Arabidopsis lyrata
AL7G49880 2.0kb downstream 2.0kb downstream 3365   true scaffold_7: 22563562-22566926 Arabidopsis lyrata
AL7G49880 2.0kb downstream 2.0kb downstream 2000   false scaffold_7: 22564927-22566926 Arabidopsis lyrata
AL7G49880 5.0kb upstream 5.0kb upstream 6365   true scaffold_7: 22558562-22564926 Arabidopsis lyrata
AL7G49880 5.0kb upstream 5.0kb upstream 5000   false scaffold_7: 22558562-22563561 Arabidopsis lyrata
AL7G49880 5.0kb downstream 5.0kb downstream 6365   true scaffold_7: 22563562-22569926 Arabidopsis lyrata
AL7G49880 5.0kb downstream 5.0kb downstream 5000   false scaffold_7: 22564927-22569926 Arabidopsis lyrata
AL7G49880 10.0kb upstream 10.0kb upstream 11365   true scaffold_7: 22553562-22564926 Arabidopsis lyrata
AL7G49880 10.0kb upstream 10.0kb upstream 10000   false scaffold_7: 22553562-22563561 Arabidopsis lyrata
AL7G49880 10.0kb downstream 10.0kb downstream 11365   true scaffold_7: 22563562-22574926 Arabidopsis lyrata
AL7G49880 10.0kb downstream 10.0kb downstream 10000   false scaffold_7: 22564927-22574926 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380418 5261 Brassicaceae View MSA
123835779 5264 Brassicales-Malvales View MSA
124346299 5266 SBM View MSA
124240815 5268 Malvidae View MSA
124069813 5270 Rosid View MSA
123741716 5271 Pentapetalae View MSA
122795989 5272 Eudicot View MSA
122048017 5273 Angiosperm View MSA
121351674 5274 Embryophyte View MSA
123426672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain