Gene : AL7G48560 A. lyrata v2.1

Defline:  (1 of 5) PTHR22835:SF174 - GDSL ESTERASE/LIPASE 1-RELATED Genomic Order:  3580
Name:  ? AL7G48560 Secondary Identifier:  ? PAC:35939701

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-6303 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL7G48560 0.5kb upstream 0.5kb upstream 2227   true scaffold_7: 21828305-21830531 Arabidopsis lyrata
AL7G48560 0.5kb upstream 0.5kb upstream 500   false scaffold_7: 21830032-21830531 Arabidopsis lyrata
AL7G48560 0.5kb downstream 0.5kb downstream 2227   true scaffold_7: 21827805-21830031 Arabidopsis lyrata
AL7G48560 0.5kb downstream 0.5kb downstream 500   false scaffold_7: 21827805-21828304 Arabidopsis lyrata
AL7G48560 1.0kb upstream 1.0kb upstream 2727   true scaffold_7: 21828305-21831031 Arabidopsis lyrata
AL7G48560 1.0kb upstream 1.0kb upstream 1000   false scaffold_7: 21830032-21831031 Arabidopsis lyrata
AL7G48560 1.0kb downstream 1.0kb downstream 2727   true scaffold_7: 21827305-21830031 Arabidopsis lyrata
AL7G48560 1.0kb downstream 1.0kb downstream 1000   false scaffold_7: 21827305-21828304 Arabidopsis lyrata
AL7G48560 2.0kb upstream 2.0kb upstream 3727   true scaffold_7: 21828305-21832031 Arabidopsis lyrata
AL7G48560 2.0kb upstream 2.0kb upstream 2000   false scaffold_7: 21830032-21832031 Arabidopsis lyrata
AL7G48560 2.0kb downstream 2.0kb downstream 3727   true scaffold_7: 21826305-21830031 Arabidopsis lyrata
AL7G48560 2.0kb downstream 2.0kb downstream 2000   false scaffold_7: 21826305-21828304 Arabidopsis lyrata
AL7G48560 5.0kb upstream 5.0kb upstream 6727   true scaffold_7: 21828305-21835031 Arabidopsis lyrata
AL7G48560 5.0kb upstream 5.0kb upstream 5000   false scaffold_7: 21830032-21835031 Arabidopsis lyrata
AL7G48560 5.0kb downstream 5.0kb downstream 6727   true scaffold_7: 21823305-21830031 Arabidopsis lyrata
AL7G48560 5.0kb downstream 5.0kb downstream 5000   false scaffold_7: 21823305-21828304 Arabidopsis lyrata
AL7G48560 10.0kb upstream 10.0kb upstream 11727   true scaffold_7: 21828305-21840031 Arabidopsis lyrata
AL7G48560 10.0kb upstream 10.0kb upstream 10000   false scaffold_7: 21830032-21840031 Arabidopsis lyrata
AL7G48560 10.0kb downstream 10.0kb downstream 11727   true scaffold_7: 21818305-21830031 Arabidopsis lyrata
AL7G48560 10.0kb downstream 10.0kb downstream 10000   false scaffold_7: 21818305-21828304 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343447 5261 Brassicaceae View MSA
123841664 5264 Brassicales-Malvales View MSA
124349446 5266 SBM View MSA
124250380 5268 Malvidae View MSA
124074404 5270 Rosid View MSA
123753785 5271 Pentapetalae View MSA
122797352 5272 Eudicot View MSA
122051674 5273 Angiosperm View MSA
121351762 5274 Embryophyte View MSA
123428079 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain