Gene : AL7G46270 A. lyrata v2.1

Defline:  (1 of 2) K03934 - NADH dehydrogenase (ubiquinone) Fe-S protein 1 (NDUFS1) Genomic Order:  3371
Name:  ? AL7G46270 Secondary Identifier:  ? PAC:35938182

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-3781 Arabidopsis lyrata pathologic  
Alyrata PWY-4302 Arabidopsis lyrata pathologic  
Alyrata PWY-5083 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL7G46270 0.5kb upstream 0.5kb upstream 4111   true scaffold_7: 20424634-20428744 Arabidopsis lyrata
AL7G46270 0.5kb upstream 0.5kb upstream 500   false scaffold_7: 20424634-20425133 Arabidopsis lyrata
AL7G46270 0.5kb downstream 0.5kb downstream 4111   true scaffold_7: 20425134-20429244 Arabidopsis lyrata
AL7G46270 0.5kb downstream 0.5kb downstream 500   false scaffold_7: 20428745-20429244 Arabidopsis lyrata
AL7G46270 1.0kb upstream 1.0kb upstream 4611   true scaffold_7: 20424134-20428744 Arabidopsis lyrata
AL7G46270 1.0kb upstream 1.0kb upstream 1000   false scaffold_7: 20424134-20425133 Arabidopsis lyrata
AL7G46270 1.0kb downstream 1.0kb downstream 4611   true scaffold_7: 20425134-20429744 Arabidopsis lyrata
AL7G46270 1.0kb downstream 1.0kb downstream 1000   false scaffold_7: 20428745-20429744 Arabidopsis lyrata
AL7G46270 2.0kb upstream 2.0kb upstream 5611   true scaffold_7: 20423134-20428744 Arabidopsis lyrata
AL7G46270 2.0kb upstream 2.0kb upstream 2000   false scaffold_7: 20423134-20425133 Arabidopsis lyrata
AL7G46270 2.0kb downstream 2.0kb downstream 5611   true scaffold_7: 20425134-20430744 Arabidopsis lyrata
AL7G46270 2.0kb downstream 2.0kb downstream 2000   false scaffold_7: 20428745-20430744 Arabidopsis lyrata
AL7G46270 5.0kb upstream 5.0kb upstream 8611   true scaffold_7: 20420134-20428744 Arabidopsis lyrata
AL7G46270 5.0kb upstream 5.0kb upstream 5000   false scaffold_7: 20420134-20425133 Arabidopsis lyrata
AL7G46270 5.0kb downstream 5.0kb downstream 8611   true scaffold_7: 20425134-20433744 Arabidopsis lyrata
AL7G46270 5.0kb downstream 5.0kb downstream 5000   false scaffold_7: 20428745-20433744 Arabidopsis lyrata
AL7G46270 10.0kb upstream 10.0kb upstream 13611   true scaffold_7: 20415134-20428744 Arabidopsis lyrata
AL7G46270 10.0kb upstream 10.0kb upstream 10000   false scaffold_7: 20415134-20425133 Arabidopsis lyrata
AL7G46270 10.0kb downstream 10.0kb downstream 13611   true scaffold_7: 20425134-20438744 Arabidopsis lyrata
AL7G46270 10.0kb downstream 10.0kb downstream 10000   false scaffold_7: 20428745-20438744 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364097 5261 Brassicaceae View MSA
123836593 5264 Brassicales-Malvales View MSA
124336428 5266 SBM View MSA
124244950 5268 Malvidae View MSA
124062856 5270 Rosid View MSA
123737847 5271 Pentapetalae View MSA
122786481 5272 Eudicot View MSA
122044121 5273 Angiosperm View MSA
121350903 5274 Embryophyte View MSA
123424434 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain