Gene : AL8G23940 A. lyrata v2.1

Defline:  (1 of 1) 5.1.99.6 - NAD(P)H-hydrate epimerase / NAD(P)HX epimerase Genomic Order:  1203
Name:  ? AL8G23940 Secondary Identifier:  ? PAC:35950552

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PLPSAL-PWY Arabidopsis lyrata pathologic  
Alyrata PWY-6938 Arabidopsis lyrata pathologic  
Alyrata PWY-7204 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL8G23940 0.5kb upstream 0.5kb upstream 4445   true scaffold_8: 13591002-13595446 Arabidopsis lyrata
AL8G23940 0.5kb upstream 0.5kb upstream 500   false scaffold_8: 13591002-13591501 Arabidopsis lyrata
AL8G23940 0.5kb downstream 0.5kb downstream 4445   true scaffold_8: 13591502-13595946 Arabidopsis lyrata
AL8G23940 0.5kb downstream 0.5kb downstream 500   false scaffold_8: 13595447-13595946 Arabidopsis lyrata
AL8G23940 1.0kb upstream 1.0kb upstream 4945   true scaffold_8: 13590502-13595446 Arabidopsis lyrata
AL8G23940 1.0kb upstream 1.0kb upstream 1000   false scaffold_8: 13590502-13591501 Arabidopsis lyrata
AL8G23940 1.0kb downstream 1.0kb downstream 4945   true scaffold_8: 13591502-13596446 Arabidopsis lyrata
AL8G23940 1.0kb downstream 1.0kb downstream 1000   false scaffold_8: 13595447-13596446 Arabidopsis lyrata
AL8G23940 2.0kb upstream 2.0kb upstream 5945   true scaffold_8: 13589502-13595446 Arabidopsis lyrata
AL8G23940 2.0kb upstream 2.0kb upstream 2000   false scaffold_8: 13589502-13591501 Arabidopsis lyrata
AL8G23940 2.0kb downstream 2.0kb downstream 5945   true scaffold_8: 13591502-13597446 Arabidopsis lyrata
AL8G23940 2.0kb downstream 2.0kb downstream 2000   false scaffold_8: 13595447-13597446 Arabidopsis lyrata
AL8G23940 5.0kb upstream 5.0kb upstream 8945   true scaffold_8: 13586502-13595446 Arabidopsis lyrata
AL8G23940 5.0kb upstream 5.0kb upstream 5000   false scaffold_8: 13586502-13591501 Arabidopsis lyrata
AL8G23940 5.0kb downstream 5.0kb downstream 8945   true scaffold_8: 13591502-13600446 Arabidopsis lyrata
AL8G23940 5.0kb downstream 5.0kb downstream 5000   false scaffold_8: 13595447-13600446 Arabidopsis lyrata
AL8G23940 10.0kb upstream 10.0kb upstream 13945   true scaffold_8: 13581502-13595446 Arabidopsis lyrata
AL8G23940 10.0kb upstream 10.0kb upstream 10000   false scaffold_8: 13581502-13591501 Arabidopsis lyrata
AL8G23940 10.0kb downstream 10.0kb downstream 13945   true scaffold_8: 13591502-13605446 Arabidopsis lyrata
AL8G23940 10.0kb downstream 10.0kb downstream 10000   false scaffold_8: 13595447-13605446 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362150 5261 Brassicaceae View MSA
123832623 5264 Brassicales-Malvales View MSA
124345777 5266 SBM View MSA
124239161 5268 Malvidae View MSA
124062248 5270 Rosid View MSA
123736621 5271 Pentapetalae View MSA
122791647 5272 Eudicot View MSA
122043003 5273 Angiosperm View MSA
121346013 5274 Embryophyte View MSA
123424546 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain