Gene : AL8G22430 A. lyrata v2.1

Defline:  (1 of 4) K01870 - isoleucyl-tRNA synthetase (IARS, ileS) Genomic Order:  1071
Name:  ? AL8G22430 Secondary Identifier:  ? PAC:35949790

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata TRNA-CHARGING-PWY Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL8G22430 0.5kb upstream 0.5kb upstream 6920   true scaffold_8: 12467137-12474056 Arabidopsis lyrata
AL8G22430 0.5kb upstream 0.5kb upstream 500   false scaffold_8: 12473557-12474056 Arabidopsis lyrata
AL8G22430 0.5kb downstream 0.5kb downstream 6920   true scaffold_8: 12466637-12473556 Arabidopsis lyrata
AL8G22430 0.5kb downstream 0.5kb downstream 500   false scaffold_8: 12466637-12467136 Arabidopsis lyrata
AL8G22430 1.0kb upstream 1.0kb upstream 7420   true scaffold_8: 12467137-12474556 Arabidopsis lyrata
AL8G22430 1.0kb upstream 1.0kb upstream 1000   false scaffold_8: 12473557-12474556 Arabidopsis lyrata
AL8G22430 1.0kb downstream 1.0kb downstream 7420   true scaffold_8: 12466137-12473556 Arabidopsis lyrata
AL8G22430 1.0kb downstream 1.0kb downstream 1000   false scaffold_8: 12466137-12467136 Arabidopsis lyrata
AL8G22430 2.0kb upstream 2.0kb upstream 8420   true scaffold_8: 12467137-12475556 Arabidopsis lyrata
AL8G22430 2.0kb upstream 2.0kb upstream 2000   false scaffold_8: 12473557-12475556 Arabidopsis lyrata
AL8G22430 2.0kb downstream 2.0kb downstream 8420   true scaffold_8: 12465137-12473556 Arabidopsis lyrata
AL8G22430 2.0kb downstream 2.0kb downstream 2000   false scaffold_8: 12465137-12467136 Arabidopsis lyrata
AL8G22430 5.0kb upstream 5.0kb upstream 11420   true scaffold_8: 12467137-12478556 Arabidopsis lyrata
AL8G22430 5.0kb upstream 5.0kb upstream 5000   false scaffold_8: 12473557-12478556 Arabidopsis lyrata
AL8G22430 5.0kb downstream 5.0kb downstream 11420   true scaffold_8: 12462137-12473556 Arabidopsis lyrata
AL8G22430 5.0kb downstream 5.0kb downstream 5000   false scaffold_8: 12462137-12467136 Arabidopsis lyrata
AL8G22430 10.0kb upstream 10.0kb upstream 16420   true scaffold_8: 12467137-12483556 Arabidopsis lyrata
AL8G22430 10.0kb upstream 10.0kb upstream 10000   false scaffold_8: 12473557-12483556 Arabidopsis lyrata
AL8G22430 10.0kb downstream 10.0kb downstream 16420   true scaffold_8: 12457137-12473556 Arabidopsis lyrata
AL8G22430 10.0kb downstream 10.0kb downstream 10000   false scaffold_8: 12457137-12467136 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360799 5261 Brassicaceae View MSA
123829224 5264 Brassicales-Malvales View MSA
124344420 5266 SBM View MSA
124243360 5268 Malvidae View MSA
124064635 5270 Rosid View MSA
123740769 5271 Pentapetalae View MSA
122790755 5272 Eudicot View MSA
122042566 5273 Angiosperm View MSA
121346634 5274 Embryophyte View MSA
123424788 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain