Gene : AL8G20820 A. lyrata v2.1

Defline:  (1 of 2) PTHR21736:SF20 - PROTEIN OBERON 1-RELATED Genomic Order:  933
Name:  ? AL8G20820 Secondary Identifier:  ? PAC:35947941

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL8G20820 0.5kb upstream 0.5kb upstream 3040   true scaffold_8: 11304328-11307367 Arabidopsis lyrata
AL8G20820 0.5kb upstream 0.5kb upstream 500   false scaffold_8: 11306868-11307367 Arabidopsis lyrata
AL8G20820 0.5kb downstream 0.5kb downstream 3040   true scaffold_8: 11303828-11306867 Arabidopsis lyrata
AL8G20820 0.5kb downstream 0.5kb downstream 500   false scaffold_8: 11303828-11304327 Arabidopsis lyrata
AL8G20820 1.0kb upstream 1.0kb upstream 3540   true scaffold_8: 11304328-11307867 Arabidopsis lyrata
AL8G20820 1.0kb upstream 1.0kb upstream 1000   false scaffold_8: 11306868-11307867 Arabidopsis lyrata
AL8G20820 1.0kb downstream 1.0kb downstream 3540   true scaffold_8: 11303328-11306867 Arabidopsis lyrata
AL8G20820 1.0kb downstream 1.0kb downstream 1000   false scaffold_8: 11303328-11304327 Arabidopsis lyrata
AL8G20820 2.0kb upstream 2.0kb upstream 4540   true scaffold_8: 11304328-11308867 Arabidopsis lyrata
AL8G20820 2.0kb upstream 2.0kb upstream 2000   false scaffold_8: 11306868-11308867 Arabidopsis lyrata
AL8G20820 2.0kb downstream 2.0kb downstream 4540   true scaffold_8: 11302328-11306867 Arabidopsis lyrata
AL8G20820 2.0kb downstream 2.0kb downstream 2000   false scaffold_8: 11302328-11304327 Arabidopsis lyrata
AL8G20820 5.0kb upstream 5.0kb upstream 7540   true scaffold_8: 11304328-11311867 Arabidopsis lyrata
AL8G20820 5.0kb upstream 5.0kb upstream 5000   false scaffold_8: 11306868-11311867 Arabidopsis lyrata
AL8G20820 5.0kb downstream 5.0kb downstream 7540   true scaffold_8: 11299328-11306867 Arabidopsis lyrata
AL8G20820 5.0kb downstream 5.0kb downstream 5000   false scaffold_8: 11299328-11304327 Arabidopsis lyrata
AL8G20820 10.0kb upstream 10.0kb upstream 12540   true scaffold_8: 11304328-11316867 Arabidopsis lyrata
AL8G20820 10.0kb upstream 10.0kb upstream 10000   false scaffold_8: 11306868-11316867 Arabidopsis lyrata
AL8G20820 10.0kb downstream 10.0kb downstream 12540   true scaffold_8: 11294328-11306867 Arabidopsis lyrata
AL8G20820 10.0kb downstream 10.0kb downstream 10000   false scaffold_8: 11294328-11304327 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361718 5261 Brassicaceae View MSA
123837666 5264 Brassicales-Malvales View MSA
124337418 5266 SBM View MSA
124242275 5268 Malvidae View MSA
124068106 5270 Rosid View MSA
123747254 5271 Pentapetalae View MSA
122789487 5272 Eudicot View MSA
122041658 5273 Angiosperm View MSA
121346503 5274 Embryophyte View MSA
123380393 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain