Gene : AL8G22200 A. lyrata v2.1

Defline:  (1 of 1) PTHR12103:SF15 - PROTEIN Y71H10B.1, ISOFORM C Genomic Order:  1050
Name:  ? AL8G22200 Secondary Identifier:  ? PAC:35948568

Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5381 Arabidopsis lyrata pathologic  
Alyrata PWY-5695 Arabidopsis lyrata pathologic  
Alyrata PWY-6596 Arabidopsis lyrata pathologic  
Alyrata PWY-6606 Arabidopsis lyrata pathologic  
Alyrata PWY-6608 Arabidopsis lyrata pathologic  
Alyrata PWY-7185 Arabidopsis lyrata pathologic  
Alyrata SALVADEHYPOX-PWY Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL8G22200 0.5kb upstream 0.5kb upstream 4497   true scaffold_8: 12361051-12365547 Arabidopsis lyrata
AL8G22200 0.5kb upstream 0.5kb upstream 500   false scaffold_8: 12361051-12361550 Arabidopsis lyrata
AL8G22200 0.5kb downstream 0.5kb downstream 4497   true scaffold_8: 12361551-12366047 Arabidopsis lyrata
AL8G22200 0.5kb downstream 0.5kb downstream 500   false scaffold_8: 12365548-12366047 Arabidopsis lyrata
AL8G22200 1.0kb upstream 1.0kb upstream 4997   true scaffold_8: 12360551-12365547 Arabidopsis lyrata
AL8G22200 1.0kb upstream 1.0kb upstream 1000   false scaffold_8: 12360551-12361550 Arabidopsis lyrata
AL8G22200 1.0kb downstream 1.0kb downstream 4997   true scaffold_8: 12361551-12366547 Arabidopsis lyrata
AL8G22200 1.0kb downstream 1.0kb downstream 1000   false scaffold_8: 12365548-12366547 Arabidopsis lyrata
AL8G22200 2.0kb upstream 2.0kb upstream 5997   true scaffold_8: 12359551-12365547 Arabidopsis lyrata
AL8G22200 2.0kb upstream 2.0kb upstream 2000   false scaffold_8: 12359551-12361550 Arabidopsis lyrata
AL8G22200 2.0kb downstream 2.0kb downstream 5997   true scaffold_8: 12361551-12367547 Arabidopsis lyrata
AL8G22200 2.0kb downstream 2.0kb downstream 2000   false scaffold_8: 12365548-12367547 Arabidopsis lyrata
AL8G22200 5.0kb upstream 5.0kb upstream 8997   true scaffold_8: 12356551-12365547 Arabidopsis lyrata
AL8G22200 5.0kb upstream 5.0kb upstream 5000   false scaffold_8: 12356551-12361550 Arabidopsis lyrata
AL8G22200 5.0kb downstream 5.0kb downstream 8997   true scaffold_8: 12361551-12370547 Arabidopsis lyrata
AL8G22200 5.0kb downstream 5.0kb downstream 5000   false scaffold_8: 12365548-12370547 Arabidopsis lyrata
AL8G22200 10.0kb upstream 10.0kb upstream 13997   true scaffold_8: 12351551-12365547 Arabidopsis lyrata
AL8G22200 10.0kb upstream 10.0kb upstream 10000   false scaffold_8: 12351551-12361550 Arabidopsis lyrata
AL8G22200 10.0kb downstream 10.0kb downstream 13997   true scaffold_8: 12361551-12375547 Arabidopsis lyrata
AL8G22200 10.0kb downstream 10.0kb downstream 10000   false scaffold_8: 12365548-12375547 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372227 5261 Brassicaceae View MSA
123831857 5264 Brassicales-Malvales View MSA
124339151 5266 SBM View MSA
124240270 5268 Malvidae View MSA
124068211 5270 Rosid View MSA
123737665 5271 Pentapetalae View MSA
122791643 5272 Eudicot View MSA
122047962 5273 Angiosperm View MSA
121348672 5274 Embryophyte View MSA
123428872 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain